Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq8696 251 1e-64 >seq8696 Length=1539 Score = 251 bits (278), Expect = 1e-64 Identities = 246/316 (78%), Gaps = 7/316 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC----TTTGGCGGGTCGCCGGCTTC 75 || |||||||| | |||||||||| | || | ||| | ||| | | |||| Sbjct 1051 GAACGAGACCTCCGCGTGCTAAATAGTCCCGCTTACAATTTTTTGTAGGTAGTGGACTTC 1110 Query 76 TTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||| | || | ||| || | ||||||| |||||||||||||||||||||| Sbjct 1111 TTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTGTGAT 1170 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 1171 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATACAACC 1230 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||| || ||| |||||||||||||| || ||||||| |||||||| ||||| Sbjct 1231 TTGTTCGATAGGACTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGATTGTTGCA 1290 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| | |||| |||||||||| |||||||| ||| ||||||||| || |||||||| Sbjct 1291 ATTTTCAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATTAC 1350 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1351 GTCCCTGCCCTTTGTA 1366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947114827776