Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8855 461 2e-127 >seq8855 Length=1172 Score = 461 bits (510), Expect = 2e-127 Identities = 380/456 (83%), Gaps = 19/456 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 722 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 781 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 782 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTC 841 Query 127 GGCCCGCG---AAGGAC---CTTAACGCCAGAAAATGGT-----CGGTGAAGACCAGTTC 175 ||||| ||| || |||| | |||| || || || | | |||| Sbjct 842 A-CCCGCACAAAAGCACAGGCTTACATCTAGAACTAGGCGCCCGCGAGGACGGCTAGTTG 900 Query 176 CG-CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGAA 232 | | |||| | ||||||||| ||| || ||||||||||||||| ||| || || Sbjct 901 CTACATCATGGTATAAGTAAAACAACATTAGAAGTAGTGGTATTTCACGGTTG-GCAGA- 958 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| Sbjct 959 --GCCTCCCACTTATTCTACACCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCAAGC 1016 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1017 TCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCG 1076 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1077 CTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTA 1136 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||||||||||||||||| Sbjct 1137 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 1172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635052962816