Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq7166 84.2 5e-14 seq5795 84.2 5e-14 >seq7166 Length=1408 Score = 84.2 bits (92), Expect = 5e-14 Identities = 159/231 (69%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACT 124 |||| ||| | || ||||| ||||||| | | ||||| || |||| | || | Sbjct 889 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCTTCACTCACTTGGTATT 830 Query 125 TGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||| Sbjct 829 --GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGT 773 Query 185 TTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTA 244 |||| |||||||||||| ||||||||| || | | || ||| | | ||| || || Sbjct 772 TTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTC 713 Query 245 GGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 |||| ||| | | ||| | || |||||||||| ||||| | |||| Sbjct 712 GGCTTGGTAGTCTTTTAAACTACCAACTACCTAATCTTACGCAAACTCATC 662 >seq5795 Length=3727 Score = 84.2 bits (92), Expect = 5e-14 Identities = 159/231 (69%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACT 124 |||| ||| | || ||||| ||||||| | | ||||| || |||| | || | Sbjct 1434 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCTTCACTCACTTGGTATT 1493 Query 125 TGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||| Sbjct 1494 --GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGT 1550 Query 185 TTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTA 244 |||| |||||||||||| ||||||||| || | | || ||| | | ||| || || Sbjct 1551 TTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTC 1610 Query 245 GGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 |||| ||| | | ||| | || |||||||||| ||||| | |||| Sbjct 1611 GGCTTGGTAGTCTTTTAAACTACCAACTACCTAATCTTACGCAAACTCATC 1661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068703893504