Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4658 387 4e-105 seq4096 383 5e-104 seq2108 297 6e-78 seq8696 275 2e-71 seq1842 80.6 8e-13 >seq4658 Length=4372 Score = 387 bits (428), Expect = 4e-105 Identities = 384/485 (79%), Gaps = 29/485 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAA-----AGAGCCCTGTATCAGTATTTATTGTCAC 55 || |||||||||||| | ||| | || ||||| ||| ||||||||||||| Sbjct 4190 GTTCTCATTCCAATTGCCCGACTCGAAGAGCAAGAGCATTGT-----TATTTATTGTCAC 4136 Query 56 TACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 |||||||| || || |||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct 4135 TACCTCCCTGTCTCAGGATTGGG-AATTTACGCGCCTGGTGCCTTCCTTGGATGTGGTAG 4077 Query 116 CCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCA 175 |||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||| Sbjct 4076 CCGTTTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCA 4017 Query 176 TGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGC 235 ||||||||| |||||||||||| |||| |||||||||||||| | ||| | || Sbjct 4016 TGGTAGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAA-CTCAAT---CGATTTA 3961 Query 236 CGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC--CCCGAAG- 291 | || ||| |||| | || ||||||||||| ||| || | | | ||||||| Sbjct 3960 CCGCACAA--AAGTGCGGTCCGCACAGTTATTATGACTCAACACAATACCAGCCCGAAGA 3903 Query 292 -GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA----AGTCGGGGTTTTTAGCA 346 || |||| ||| |||||| |||| | ||| ||||| ||| ||| || ||| Sbjct 3902 CTGCATTGG-TTTCAATCTAACAAATGCTACCCGTCCGACAAGAGTTGGGTATTGATGCA 3844 Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGAT 406 || || |||||||||||||| ||||||||||| ||||||||||||| || | || || | Sbjct 3843 TGCATAAGCTCTAGAATTACAACGGTTATCCAAGTAGTAAGGTACTGTCGAGTAGACTTT 3784 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 |||||| ||||||||||||||||||||||| || || |||||||||||| |||||||| Sbjct 3783 TACTGATGTAATGAGCCATTCGCAGTTTCACAGT-GAG-TTGCTTATACTTTGACATGCA 3726 Query 467 TGGCT 471 ||||| Sbjct 3725 TGGCT 3721 >seq4096 Length=2679 Score = 383 bits (424), Expect = 5e-104 Identities = 329/399 (82%), Gaps = 17/399 (4%) Strand=Plus/Plus Query 46 TTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTG 105 |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| Sbjct 2096 TTATTGTCACTACCTCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTG 2155 Query 106 GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165 |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 2156 GATGTGGTAGCCGTTTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCC 2215 Query 166 GTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225 ||| || |||||||||||| |||||||||||| |||| |||||||||||||| | ||| Sbjct 2216 GTTAATGCCATGGTAGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAA-CTCAAT 2274 Query 226 GAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC 284 | || | || ||| |||| | || ||||||||||| ||| || | | | Sbjct 2275 ---CGATTTACCGCACAA--AAGTGCGGTCCGCACAGTTATTATGACTCAACACAATACC 2329 Query 285 --CCCGAAG--GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGG 335 ||||||| || |||| ||| ||||||||||| | ||| ||||| ||| || Sbjct 2330 AGCCCGAAGACTGCATTGG-TTTCAATCTAATAAATGCTACCCGTCCGACAAGCAGTTGG 2388 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 | || ||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 2389 GTATTGATGCATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATC 2448 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 434 | || || ||||||||| |||||||||||||||||||| Sbjct 2449 GAGTAGACTATAACTGATATAATGAGCCATTCGCAGTTT 2487 >seq2108 Length=1890 Score = 297 bits (328), Expect = 6e-78 Identities = 283/355 (80%), Gaps = 18/355 (5%) Strand=Plus/Minus Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 |||||||| || |||||||||||| |||||||||||| |||| |||||||||||||| | Sbjct 1890 TACCCGTTAATGCCATGGTAGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAACT 1831 Query 221 TGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-A 279 | || | ||| | ||| |||| | || ||||||||||| ||| || | Sbjct 1830 CAATCGATTTACCGCA--CAAAAG----TGCGGTCCGCACAGTTATTATGACTCAACACA 1777 Query 280 GGAGC--CCCGAAGG--GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----A 330 | | ||||||| || ||||||| ||||||||||| | ||| ||||| | Sbjct 1776 ATACCAGCCCGAAGACTGCATTGGTTTCA-ATCTAATAAATGCTACCCGTCCGACAAGCA 1718 Query 331 GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA 390 || ||| || ||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1717 GTTGGGTATTGATGCATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTA 1658 Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGC 449 ||||| | || || ||||||||| ||||||||||||||||||||||| ||| | | ||| Sbjct 1657 CTATCGAGTAGACTATAACTGATATAATGAGCCATTCGCAGTTTCACAGTACAAAGTTGT 1598 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1597 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 1543 >seq8696 Length=1539 Score = 275 bits (304), Expect = 2e-71 Identities = 194/219 (89%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | || ||||| | || ||||||||||||||||| Sbjct 237 GTTCTCATTCCAATTGCCCGACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCACTACC 179 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 178 TCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||| Sbjct 118 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGT 59 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAA 218 ||||| |||||||||||| |||| |||||||||||||| Sbjct 58 AGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAA 20 >seq1842 Length=5231 Score = 80.6 bits (88), Expect = 8e-13 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 446 TTGCTTATAC--TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||| || Sbjct 1271 TTGTTTATACACTTAGACATGCATGGCTTAATCTTTGAGATAAGCGTATGACTACTGACA 1212 Query 504 G 504 | Sbjct 1211 G 1211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510264184832