Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3132 311 7e-80 seq4347 208 6e-49 >seq3132 Length=41768 Score = 311 bits (344), Expect = 7e-80 Identities = 738/1096 (67%), Gaps = 33/1096 (3%) Strand=Plus/Minus Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 ||| |||| || | |||||||| ||| || || || || ||||| ||||||||| Sbjct 32834 GCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCGTCGCTCTCG 32775 Query 65786 TACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 ||| | || ||||| |||| || | ||| || ||||| || || || || ||||| || Sbjct 32774 AACG-CGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGG 32716 Query 65845 ACGATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAA 65903 || || |||| ||| || |||| |||| || | |||||||| ||||| ||||| | Sbjct 32715 GCGGTGGCGCAGGTTGCTGCG-CTCGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATGA 32657 Query 65904 TGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAAAA 65962 |||| ||||| || || || | ||| ||| | || || ||| ||||| Sbjct 32656 CCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCGTAGAGCTTCTT-GAAGTCAAAG 32598 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 || | || |||| ||||||||||| || || | || |||||| Sbjct 32597 GTCTT--GTCG-TCGGT------------CACAAACTTGGACAGCGCGATGGACGCGAGG 32553 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| || || | ||| || || | || ||||||| | ||| ||| || || || Sbjct 32552 TTGCACACCGCGACCTCATCGGGCGACGTGTACTCGAGCACCTCGCAGCAGAGGTTGCTC 32493 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 |||| || ||||| | ||||| || || |||||| ||||| | |||||||||| | Sbjct 32492 GAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGC 32433 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA-GC-GCGTG 66200 |||||||| ||||| ||||| | || ||||| | ||| ||| ||| || || ||| | Sbjct 32432 ATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGCTGCTGCGCG 32373 Query 66201 CCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259 | | ||| | | | ||| | || | ||| ||||| || | ||| || ||||| Sbjct 32372 CGG--ATCGT-CTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAAC 32316 Query 66260 GATTCACCCCATACTTCGGACAGA--CATGGACACTTGTGTGGACACATCAGCGACCAAT 66317 || ||||| | ||| ||| | || || || || || | ||| ||| | Sbjct 32315 TCGTCGCCCCA--CGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACT 32258 Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | || | || || || ||| || ||||| || ||||| | ||||||||||||| Sbjct 32257 CGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGAT 32198 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | || || || ||| ||| ||||||| || || | ||| |||||||| ||||||| Sbjct 32197 CACGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCCAGGAACTCGAAGATGT 32138 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 |||| ||||| || |||||||| || |||||||||||| | || |||||||| || |||| Sbjct 32137 CGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGT 32078 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 |||||||||| || | ||||||||| |||| ||| || ||||| ||||| || || Sbjct 32077 CGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGAGGCCGTTCGACGAGC 32018 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATA 66616 | || |||||| |||| || |||| || || || | ||| || | | || || Sbjct 32017 CGTTCGTGCCGCGGATGTACGA-GTTCGTCGCGCGGATGTTGTGCACGCTGACGCCGATG 31959 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATG 66676 || || ||| ||| |||||| || || | | || | | ||||| || || Sbjct 31958 CCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATC 31899 Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736 ||||| |||| |||| || ||| |||| || || || || || ||| | || Sbjct 31898 GAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCCGCG 31839 Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796 ||| || || || || |||||||| ||| | | |||||||| | |||||||||| Sbjct 31838 TTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCTCG 31779 Query 66797 ATGACAGCATCAATGT 66812 | |||| ||||||| Sbjct 31778 AGCGCAGCGTCAATGT 31763 >seq4347 Length=93765 Score = 208 bits (230), Expect = 6e-49 Identities = 600/893 (67%), Gaps = 39/893 (4%) Strand=Plus/Minus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 |||||||| | ||||| ||| || | | || | |||| |||||||| ||||| || Sbjct 73307 CGTTTCGTGCTTTTCCCGATCCAGGAGAACGAGGTGTGGCAGATGTACAAGAAGGCCGAG 73248 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTT-GTCCAAAGACATGAATGACTGGGAGCG 61172 || ||||||||| | |||||| ||||| | || || ||| | || ||||||| || Sbjct 73247 GCGAGCTTCTGGACCGCCGAGGAGATCGATCTCGTGCAC-GACCTCAAGGACTGGG-GCA 73190 Query 61173 TTTATCGAGCGGTGAACAA----CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTT 61228 | | ||| ||| | || || || || || || | |||||||| || || Sbjct 73189 ---ACCTCACGGACAACGAGCGCCACTTTATCAAGCACGTCCTCGCGTTCTTCGCGGCGA 73133 Query 61229 CGGACGGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAG-GAGGTGCAAGTGT 61285 |||||||||||||| ||||| | | |||| ||| |||| |||||||| || Sbjct 73132 GCGACGGTATCGTCAACGAGAACCTCGCGATGAAC--TTCA-GCAGCGAGGTGCAGGTTC 73076 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||| Sbjct 73075 CTGAGGCGCGTTGCTTCTATGGCTTCCAGATCGCCATTGAGAACATCCACTCGGAGGTGT 73016 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAAT 61404 || | ||||| || |||||||||| ||| | | ||| | |||| | | || Sbjct 73015 ACTCGCTGCTCATTGACACGTACATCAAGGACCAGACGG-AGAAGAACCACCTCCTCCGC 72957 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-AC 61463 ||||||||||| || || ||| || ||| ||| | ||||| |||| ||| | || Sbjct 72956 GCCATCGAGACCATTCCATGCGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGAC 72897 Query 61464 CAGTACAACGGCTACATTTGGTGAACG-ATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 | | | || | |||| ||| || |||| | || || || | || ||||| | | Sbjct 72896 TCGCGCCGC-GCGGCTTTTGCTGAGCGCATTG-TCGCGTTCGCTGCCGTTGAGGGCATTT 72839 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 | ||| || ||||| | | ||||| ||| | ||||| ||||| || ||||| || | Sbjct 72838 TCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCC 72779 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 | | |||| || ||| | || || ||||| |||||| | || || || || ||| Sbjct 72778 TCAGCTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTCCACTGCGACTTCGCTTGCC 72719 Query 61643 TGC--TATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGT 61700 ||| || || || ||| | | || | ||| ||||| ||| | |||||| | Sbjct 72718 TGCTGTACTCCAA-GCT-TGTCAACAAGC-TCC--CGGAGTCGCGCATCCATGAGATCAT 72664 Query 61701 TCGTGAGGCGGTAACTATCGAACAGGAATT--TC--TGACTGACGCTTTGCCCGTCTCAC 61756 ||| || || || | || || |||| || || |||| ||||| || ||| | Sbjct 72663 TCGCGATGCCGTCGCGATTGAGAAGGAGTTCGTCCAGGACT--CGCTT--CCGGTCGAGC 72608 Query 61757 TCATCGGCATGAA-TTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 | ||||||||||| | || | || |||| ||||| || || || ||||| || || Sbjct 72607 TGATCGGCATGAACTCGTCG-CTCATGTGCCAGTACATCGAGTTCTGCGCCGATCGCCTC 72549 Query 61816 TTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGAC 61875 | || | ||| | ||| || || | ||||| ||||| | |||||| Sbjct 72548 CTCCACGCGCTTGGTGTCGCCAAGATTTACAAGGTGTCGAACCCGTTTGACTGGATGGAC 72489 Query 61876 ATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 ||||| ||||| | |||||||| || || |||||||| || || ||||| || Sbjct 72488 ATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGAGTA 72436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397524430522880