Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001029375.1_202015-05-08] 1,192 sequences; 53,239,050 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq47 78.8 1e-12 seq49 75.2 2e-11 >seq47 Length=221664 Score = 78.8 bits (86), Expect = 1e-12 Identities = 99/136 (73%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 64 GCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCC 123 || |||||||| || || ||||||||||| || || |||| |||||| ||||| || Sbjct 27218 GCGGGCGCTTCCTCGAGCACCTTCTGGTGGCGGCGCTGCACCGAGCAGTCGCGCTCAAAG 27159 Query 124 AGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTG 183 ||||| | | ||| ||| | |||| | || |||| |||||||| || || ||| Sbjct 27158 AGGTGCACGACGTTGCCGTACTTGTCGCCAAAGACCTGCAGCTCCACGTGGCGCGGCTTG 27099 Query 184 GTCAGGTACTTTTCCA 199 ||||||||| |||| Sbjct 27098 CGCAGGTACTTCTCCA 27083 >seq49 Length=219097 Score = 75.2 bits (82), Expect = 2e-11 Identities = 123/178 (69%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 64 GCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCC 123 ||||||||| || || ||||||||||| ||||| |||| |||||| || |||| | Sbjct 21754 GCCGGCGCTGTCTCGAGCACCTTCTGGTGGCGACGCTGCACCGAGCAGTCACGGTGGTGA 21813 Query 124 AGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTG 183 ||||| | | ||| ||||| |||||| || | || | || | ||| || || || Sbjct 21814 AGGTGCACGACGTTGCCCTTGCCGTCACCGAGGATCTGAATCTCGATGTGGCGNGGCTTA 21873 Query 184 GTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAGC 241 | || ||| || | | ||||| | || ||||||| ||| ||| ||||||| Sbjct 21874 GACACGTAGCGCTCGATGAAGACCGTGCCGTCGCCGAACGCAGCGAGCGCCTCGGAGC 21931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735991501040