Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5435 262 6e-68 seq4675 77.0 5e-12 >seq5435 Length=1988 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 1771 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 1714 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| |||| | |||||||| ||||||||| | ||||||| |||| |||||| Sbjct 1713 CTCGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATGCGCATTCACAAGATT 1654 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| |||||| || |||||||||| ||||||||||||||||||||| Sbjct 1653 ACCCAGACCTATCGATCAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGCG 1594 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1593 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 1545 >seq4675 Length=2614 Score = 77.0 bits (84), Expect = 5e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||||||||||||||||||||||| | ||| ||||||||||||||||| ||| ||| Sbjct 31 CAGTGTAGCGCGCGTGCGGCCCAGGGCGTCTGAGGGCATCACAGACCTGCTATCGCC 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751874137055