Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7242 129 2e-27 seq5155 77.0 1e-11 >seq7242 Length=1169 Score = 129 bits (142), Expect = 2e-27 Identities = 79/84 (94%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| Sbjct 1169 AGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 1110 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||||||||||||||| Sbjct 1109 CGTCAAACTTGGGTATAGGGGCGA 1086 >seq5155 Length=2185 Score = 77.0 bits (84), Expect = 1e-11 Identities = 86/115 (75%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 || |||||||| ||||| ||||||| | |||| || ||| | |||| |||||||| Sbjct 1812 GGGCCCGAAAGGCGGTGATCTATGCCCGGCGAGGGCGAGGCCGGGCGAAAGCCTGGTGGA 1753 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||| ||||| ||| || ||| |||| ||||| | ||| || ||||||| Sbjct 1752 GGCCCGCCGCGGTGCTGACGCGCAGATCGCTCGTCGGAGCCGGGCATGGGGGCGA 1698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079629408350