Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq17074 114 2e-23 >seq17074 Length=304 Score = 114 bits (126), Expect = 2e-23 Identities = 166/235 (71%), Gaps = 21/235 (9%) Strand=Plus/Minus Query 14 CACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTT 73 ||||||||||| ||||| || |||||||| ||||| | || ||| | ||| ||||| Sbjct 304 CACCGGGCAGGTGTCAGACCCTATACATCATGTTACCAT-TTAGCAGAGTCCTAAGTTTT 246 Query 74 TAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCAC 133 || ||||||||||| ||| ||||||| ||| ||| | | |||| Sbjct 245 TATTAAACAGTCGCAACCCCCTATTCTGTGCCACC---------TTATT------TTCAT 201 Query 134 CAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACA 193 || | || | ||||||||||||||| | | ||||||||||| |||||| | | | Sbjct 200 AAG-----GTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTTCAATATA 146 Query 194 GTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||| | | | ||||||| | ||| |||| |||||||||||||||| |||| Sbjct 145 GTTCTCTCATTCACCTTAGTCTACTCGACCTATTCACCTGTGTCGGTTTAGGGTA 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694283777621