Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5435 311 1e-82 seq4675 84.2 3e-14 >seq5435 Length=1988 Score = 311 bits (344), Expect = 1e-82 Identities = 219/249 (88%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1612 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 1553 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA-- 131 ||||||| |||| | || | |||| ||||||||||||||| | | ||| || | | Sbjct 1552 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCCTCTAAGAAGTCCACTACCTACAAAAAA 1493 Query 132 --GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 || ||| |||||||||| | ||||||||||||||| ||||||||||||||||| Sbjct 1492 TTGTAAGCGGGACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACAA 1433 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1432 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCT 1373 Query 250 CAATCTGTC 258 ||||||||| Sbjct 1372 CAATCTGTC 1364 >seq4675 Length=2614 Score = 84.2 bits (92), Expect = 3e-14 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 8 TGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTT 67 |||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||| | Sbjct 22 TGGCCCCGCCAGTGTAGCGCGCGTGCGGCCCAGGGCGTCTGAGGGCATCACAGACCTGCT 81 Query 68 ATTGCC 73 || ||| Sbjct 82 ATCGCC 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796666638837