Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq7212 381 1e-103 seq5155 145 1e-32 >seq7212 Length=1178 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 429 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 488 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 489 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 548 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 549 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 608 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 609 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 668 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 669 CCACGCTTTCACGGTTTGTATTCA 692 >seq5155 Length=2185 Score = 145 bits (160), Expect = 1e-32 Identities = 130/159 (82%), Gaps = 7/159 (4%) Strand=Plus/Plus Query 79 TCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG---GTAT 135 ||||| ||||| | | ||||||||||||| |||||| ||| | | | || | | Sbjct 1 TCACGATCCCT-TGAACGGGTGAACAATCCGACGCTT-CCGCG--CCGGTGCGCGCGGAC 56 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 | |||||||||||||||||||||||||||||||| ||||||| | |||| ||| ||| Sbjct 57 GGTAGGAAGAGCCGACATCGAAGGATCAAAAAGCCGCGTCGCTGCGGGCGCTCGGCGGCC 116 Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||||||||||||||||||||| |||||| Sbjct 117 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGCCACCTC 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854252385312