Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq7419 123 7e-26 >seq7419 Length=1114 Score = 123 bits (136), Expect = 7e-26 Identities = 132/173 (76%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 |||| |||||| ||||||||| ||| | ||||||| |||| ||| |||| | Sbjct 172 GCGTAAGATTAGGTAGTTGGTAGTTTAAAAGACTACCAAGCCGACTATCTTTAGCTGGTT 113 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 ||| || ||||| |||||||||| |||||||||||| ||||||| | ||||||| Sbjct 112 TGAAAGAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACT-TTTTTAAAGGCAGC 54 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAG 333 |||||||||| ||| |||||| || ||||| |||| |||||| || ||||| Sbjct 53 AGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCAGCAATACCAAGTGAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497341259648