Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5435 257 3e-66 seq4675 78.8 2e-12 >seq5435 Length=1988 Score = 257 bits (284), Expect = 3e-66 Identities = 247/316 (78%), Gaps = 7/316 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC----TTTGGCGGGTCGCCGGCTTC 75 || |||||||| | |||||||||| | || | ||| | ||| | | |||| Sbjct 1455 GAACGAGACCTCCGCGTGCTAAATAGTCCCGCTTACAATTTTTTGTAGGTAGTGGACTTC 1514 Query 76 TTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||| | || | ||| || | ||||||| |||||||||||||||||||||| Sbjct 1515 TTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTGTGAT 1574 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 1575 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATACAACC 1634 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||| || |||||||||||||||||| || ||||||| |||||||| ||||| Sbjct 1635 TTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGATTGTTGCA 1694 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| | |||| |||||||||| |||||||| ||| ||||||||| || |||||||| Sbjct 1695 ATTTTCAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATTAC 1754 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1755 GTCCCTGCCCTTTGTA 1770 >seq4675 Length=2614 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172 ||| ||| ||||||||||||||||| ||| | |||||||||||||||||||||||| | Sbjct 87 GGCGATAGCAGGTCTGTGATGCCCTCAGACGCCCTGGGCCGCACGCGCGCTACACTGGCG 28 Query 173 GAGCCA 178 | |||| Sbjct 27 GGGCCA 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947036352256