Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq7212 466 6e-129 seq5155 199 1e-48 >seq7212 Length=1178 Score = 466 bits (516), Expect = 6e-129 Identities = 382/459 (83%), Gaps = 19/459 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 725 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 784 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 785 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTC 844 Query 127 GGCCCGCG---AAGGAC---CTTAACGCCAGAAAATGGT-----CGGTGAAGACCAGTTC 175 ||||| ||| || |||| | |||| || || || | | |||| Sbjct 845 A-CCCGCACAAAAGCACAGGCTTACATCTAGAACTAGGCGCCCGCGAGGACGGCTAGTTG 903 Query 176 CG-CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGAA 232 | | |||| | ||||||||| ||| || ||||||||||||||| ||| | | Sbjct 904 CTACATCATGGTATAAGTAAAACAACATTAGAAGTAGTGGTATTTCACGGTTG----GCA 959 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | | ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| Sbjct 960 AAGCCTCCCACTTATTCTACACCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCAAGC 1019 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1020 TCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCG 1079 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1080 CTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTA 1139 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 ||||||||||||||||||||||||||||||||||||||| Sbjct 1140 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 1178 >seq5155 Length=2185 Score = 199 bits (220), Expect = 1e-48 Identities = 199/256 (78%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG--CCAAGCCCGTT 334 ||| || ||||||||||||| ||||||||||| |||||||| ||| || ||||||| Sbjct 452 CGGGCTGGAGTCAAGCTCAAAAGGGTCTTCTTGCCCCGCTGG--CCGGCCCTCGCCCGTT 509 Query 335 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 ||| ||||| | |||| | | | |||||||||||| |||||| |||||| Sbjct 510 CCCGAGGCTGGAGGCTCGCGGAGGCGCGGCTCGGGACAGTGGGATCCTCGTTGGTCCATT 569 Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 ||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 570 CATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT 629 Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||||||||||||| | |||| | | || |||||| |||| || ||||||||||| Sbjct 630 CCCGCCGTTTACCAGGGCTTCGGCGGATCGCTTCACGGTGACGGTCGTGGCACTGGGCAG 689 Query 515 AAATCACATTGCGTCA 530 ||||||| | ||| || Sbjct 690 AAATCACGTCGCGCCA 705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634917486496