Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq16319 111 5e-22 seq5155 89.7 2e-15 >seq16319 Length=321 Score = 111 bits (122), Expect = 5e-22 Identities = 228/332 (69%), Gaps = 14/332 (4%) Strand=Plus/Minus Query 87 CCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCC 146 |||||||||| ||| ||||| | |||||||||| |||||||| |||| ||||||| Sbjct 321 CCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCATACACTGTCT- 264 Query 147 CAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGTATTTCAACAAC 206 | | | | || |||| |||| | | | ||||||||||||||| Sbjct 263 --ATTTATTTAA------AATATTAGTTATCTATTTTAATAAGAGTGGTATTTCAATGTT 212 Query 207 GACTCCACAAC-CACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGC 265 || |||| |||| ||||| | ||| || |||||| ||| ||||||| | Sbjct 211 ATCTAAACAATTCACTTGCGTGAAGGTCTCAAAGATTCCCACTTATGCTACACATATTAG 152 Query 266 ACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGC-GC 323 | |||| ||||| ||| | |||| ||||| | |||||||||| |||| | | Sbjct 151 ATAGAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGTCTAACTATAGA 92 Query 324 GAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGG 383 ||| | ||||||| || || | ||| ||||| | | || | | |||||||| ||| Sbjct 91 GAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGA 33 Query 384 AGTCGTTACGCCATTCGTGCAGGTCGGAACTT 415 |||||||| |||||| ||||||||||||||| Sbjct 32 TGTCGTTACACCATTCATGCAGGTCGGAACTT 1 >seq5155 Length=2185 Score = 89.7 bits (98), Expect = 2e-15 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||| |||||| |||| ||||||| || |||||| ||| |||| ||||||||| || Sbjct 557 TCGTTGGTCCATTCATGCACGTCGGAAATTGCCCGACGAGGCATTTGGCTACCTTAAGAG 616 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 || |||||||| ||||||||||| ||||||| Sbjct 617 AGTCATAGTTACTCCCGCCGTTTACCAGGGCTTC 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702105876352