Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950795.1_202016-12-27] 17,277 sequences; 65,230,783 total letters Query= NC_027197.1 Length=3753 Score E Sequences producing significant alignments: (Bits) Value seq3078 141 2e-30 seq2109 93.3 1e-15 seq3194 89.7 1e-14 >seq3078 Length=5057 Score = 141 bits (156), Expect = 2e-30 Identities = 198/278 (71%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 1257 GCTCAAGTGACCAAGAGATCGCCAGAGGAAAAGAAGAGAAAACTTGACGATGTCATCAAG 1316 ||||||||||| | | || | || || |||||| | ||||| ||||| |||||| | Sbjct 37 GCTCAAGTGACTTTGCGGTCCGCGGAAGAGAAGAAGCGTAAACTAGACGACATCATCATG 96 Query 1317 GAGATGCGAGGCATGATCGAAGAAGGACGCGAAGAGGAAGCCTTCACCAAGTTTCCTCGA 1376 |||||||| || ||||| ||||| ||| || || |||||||||| ||||||||||| Sbjct 97 GAGATGCGTGGGATGATTGAAGAGGGAAAAGACGATGAAGCCTTCAAGAAGTTTCCTCGC 156 Query 1377 AACTACTTGACCTATGGAGAAAAGCTGAAAGCTATGATCTCACAGCGTCGTGACTTTTTC 1436 || ||| |||| ||||| |||||| | || | | | ||| || |||| ||| Sbjct 157 AATTACCTGACGTATGGTGAAAAGATCAAGTCGCTCGTTGTGCAGAAACGAAACTTGTTC 216 Query 1437 AAGAGCAACGGTGACCCTCACATCTGGCTTACTGGTACTCCTGGTTCTGGCAAGTCTGCC 1496 ||| ||||||||||| || | ||||| ||| |||||| |||| || ||||| Sbjct 217 AAGGCTAACGGTGACCCCCATGTTTGGCTGTGGGGTCTGCCTGGTACTGGAAAATCTGCG 276 Query 1497 ATCTTGCAGGTCATCTATCCTGCGTATTACAACAAGAA 1534 | || || |||||||| |||| ||||||||| Sbjct 277 CTGATGGGCGTGATCTATCCACACTATTGCAACAAGAA 314 >seq2109 Length=8260 Score = 93.3 bits (102), Expect = 1e-15 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 1524 TACAACAAGAATCTGGACAACCGTTTCTTCGACTTGTACCAGCCAAAAGTGCACACGCAC 1583 ||||| ||||| || ||| || |||||||| || || | || || | |||||||| Sbjct 5869 TACAAAAAGAACCTATTCAATCGGTTCTTCGATTTATATGATCCGAAGGAACACACGCAT 5810 Query 1584 ATGCTTCTTCAAGATGTCGATCACACGACGGTTGAAAAGTTGGGAGTCCAGTTCCTAAAG 1643 || | | |||| | || ||| || | |||||| || | || | || | || Sbjct 5809 GTGATGTTGGAAGACCTAGACCACGAAGCGATCGAAAAGCTGAGTATCAACTTTATCTAG 5750 Query 1644 ACCATCTGTGACGAAGCTGGTTTCCCAGTTGACCAAAAGTACAAGACGCCGCAACTGGC 1702 |||||||| || |||||||| ||| | |||| |||||||||||||| ||||||||||| Sbjct 5749 ACCATCTGCGATGAAGCTGGGTTCTCCATTGATCAAAAGTACAAGACACCGCAACTGGC 5691 >seq3194 Length=4787 Score = 89.7 bits (98), Expect = 1e-14 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 1554 GACTTGTACCAGCCAAAAG-TGCACACGCACATGCTTCTTCAAGATGTCGATCACACGAC 1612 ||||||||| | | | ||| | ||||| |||| | | || | ||| | || |||| | Sbjct 3829 GACTTGTACGA-CGACAAGATCCACACTCACACGATCCTCGAGGATCTGGACTACACTGC 3771 Query 1613 GGTTGAAAAGTTGGGAGTCCAGTTCCTAAAGACCATCTGTGACGAAGCTGG-TTTCCCAG 1671 | | || | |||||| || | || || ||||| ||||| ||||||||||| ||| || Sbjct 3770 GATGGACACGTTGGGGATCAACTTTCTGAAGACGATCTGCGACGAAGCTGGCTTTAGCA- 3712 Query 1672 TTGACCAAAAGTACAAGACGCCGCAACTGGCTCGTACCAC-TGTCTTGGTCTCTTCCAAC 1730 | ||||| |||||||||||||| ||| || |||| || || |||| | || || |||| Sbjct 3711 TCGACCAGAAGTACAAGACGCCTCAATTGACTCGCACTACGTGTC-TCATCACTAGCAAC 3653 Query 1731 TTCACCATC 1739 | ||| ||| Sbjct 3652 TACACGATC 3644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11895351743990