Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6158 219 2e-54 seq9251 82.4 3e-13 >seq6158 Length=1222 Score = 219 bits (242), Expect = 2e-54 Identities = 208/267 (78%), Gaps = 29/267 (11%) Strand=Plus/Minus Query 445 TGCGAGTGTTTGGGTGTC-AAACCCGTGCGCGTAATGAAAGTGAACG------------- 490 |||||||||| |||||| |||||| ||||| ||||||||| || | Sbjct 1219 TGCGAGTGTTAGGGTGTGGAAACCCCAGCGCGGAATGAAAGTAAAGGACAGCTCAGCTGT 1160 Query 491 --GAGGTGGGAACCCGT--------GAGGGTGCACCATCGACCGATCCTGATGTCTTCG- 539 ||||| |||| || | |||| |||| ||||||||||| ||| ||||| Sbjct 1159 CTGAGGTAGGAAACCTTTGCTTGCGGAGGTGGCACTATCGACCGATCATGAAC-CTTCGT 1101 Query 540 ---GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTG 596 || ||||||||| ||||| | |||||| |||||||||||||||||||||||||| Sbjct 1100 GGTGAAAGATTTGAGTTTGAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTG 1041 Query 597 AATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656 | |||||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||| Sbjct 1040 AGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATC 981 Query 657 GATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||||||||||||||| Sbjct 980 GATCGTCAAACTTGGGTATAGGGGCGA 954 >seq9251 Length=658 Score = 82.4 bits (90), Expect = 3e-13 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CA 463 || ||||||||| |||||||||||||||||||| ||| | |||||||||| ||| || | Sbjct 145 CGTCCCGTCTTGAAACACGGACCAAGGAGTCTACCATGTGTGCGAGTGTTAGGGCGTGGA 86 Query 464 AACCCGTGCGCGTAATGAAAGTGAA 488 ||||| |||| | ||||||| || Sbjct 85 AACCCCAGCGCAGAGTGAAAGTAAA 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079674968150