Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq3636 105 2e-20 >seq3636 Length=2448 Score = 105 bits (116), Expect = 2e-20 Identities = 231/342 (68%), Gaps = 12/342 (4%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||| | ||||| ||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 1256 TACTTAAAGAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 1198 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGT 120 || ||| ||| ||||||| | | ||||||||| || | ||| |||| | || || | Sbjct 1197 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTA----AGTT 1142 Query 121 GTGAAATCC----CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGT 176 | ||| | ||| ||| | || | || |||| | ||| |||| | Sbjct 1141 GAAAAAAACAAATTAAAGCTCAACTTTATAAATTTTTTCAAAACTGAAAAACTTGAGTAT 1082 Query 177 -GTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACA 235 ||||| ||||||| | || || | |||| || |||| | ||||| | Sbjct 1081 AAATAGAGGATAATGGAATTTCTATTGGAGGGATAAAATATGTTGATAATAGAAGGAAGA 1022 Query 236 CCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 | | ||||||||| ||||| | |||||| || | |||||||| ||||||| Sbjct 1021 TCGAGAGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGGAG 962 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | ||| |||||||| |||| ||||||||| || |||||||| Sbjct 961 CGAACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGAT 920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289404586912