Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq4453 233 4e-59 seq3955 82.4 2e-13 >seq4453 Length=1923 Score = 233 bits (258), Expect = 4e-59 Identities = 211/267 (79%), Gaps = 9/267 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||||||| | ||||||| | | ||||| Sbjct 1665 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 1724 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1725 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 1784 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||||||||| ||| |||| ||||| |||| ||| Sbjct 1785 GAGTTACGGCCGCCGTTTACTGGGACTTCCATTCAATGCTT---------AAACATCTCC 1835 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||||||||||| ||||| |||||||||| | || | | ||||||| Sbjct 1836 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATATTACCATTTAGCAG 1895 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273 | ||| |||||| ||||||||||| Sbjct 1896 AGTCCTAAGTTTTTATTAAACAGTCGC 1922 >seq3955 Length=2219 Score = 82.4 bits (90), Expect = 2e-13 Identities = 96/129 (74%), Gaps = 7/129 (5%) Strand=Plus/Minus Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC----T 295 |||||||| ||| |||||| ||||||||||| || ||| | ||| ||| | Sbjct 2215 TTAGCAGAGTCCTAAGTTTTTATTAAACAGTCGCAACCCCCAATTATGTGCCGCCATATT 2156 Query 296 GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACA 355 ||||| ||||||| |||| || ||||||| ||| || ||||||||||||||| | Sbjct 2155 TTCATAT---GGCACCCTTTCTTCCGAAGTTACAGGGCCAATTTGCCGAGTTCCTTCAAT 2099 Query 356 ATAGTTCTC 364 ||||||||| Sbjct 2098 ATAGTTCTC 2090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062239014528