Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3955 129 2e-27 >seq3955 Length=2219 Score = 129 bits (142), Expect = 2e-27 Identities = 355/535 (66%), Gaps = 27/535 (5%) Strand=Plus/Minus Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTAC 115 ||||||||||| || ||| ||||| || | ||||||||| || |||||||||| Sbjct 1489 ATTCGGAGTTTCTAAGAGTTCAGTAAGTTTTTACGCCCCCTAGCTCAATGAGTGCTCTAC 1430 Query 116 CTCCGGGAAGAAACACGCG---ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTAT 172 | | || ||| | | ||| || | ||| |||||| ||| |||||||||| Sbjct 1429 CCC----AAAAAAAGCTTTTAAATGCTCTACTTCAATAGATTTCGCGGAAAACCAGCTAT 1374 Query 173 CACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTA 232 | | ||||||||| ||||||||| |||| ||||| ||||| || | ||| | || || Sbjct 1373 CTCCGAGTTTGATTAGCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACATA 1314 Query 233 AGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCAC 292 ||| ||||| |||| || || ||||| ||||| ||| ||||| |||||||| Sbjct 1313 TGTGAGTTCGATCCTTCAAATAGTTTTACCTATTTTTCAATCTGTTCATGGTTAGATCAC 1254 Query 293 TTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGG 352 | | |||||||||| | | ||| | | | | | || ||| | || ||||| Sbjct 1253 TCGGTTTCGGGTCTTATTTTTATAACTTAAAAG-CATTTTAAAACTTGTGTTATCTACGC 1195 Query 353 CTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAG 412 |||| | | |||| || || | | || ||||| || ||| |||| | |||||| Sbjct 1194 CTACTTTATA-AAATTAAGCTTGCTATA-AAAATAAACTTGCTGGCCCATTATGCAAAAG 1137 Query 413 GCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGT 472 | || | ||||| | || ||||| || ||| | |||||| || || Sbjct 1136 GTACACTGTCACTT--TA-ATAAAA--------AGTTCCAATTGATTGTTAACATTAAGT 1088 Query 473 TTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGT 532 |||| | | ||||||| | | | | | ||||||||||||| | || |||||||| Sbjct 1087 TTCA-GAATTATTTCA---AACTCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGT 1032 Query 533 CCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 | |||||||||| || | || ||| || ||||||| || | | ||||| Sbjct 1031 TCACTATCGGTCATTAATTATTA--AAGGTTTTGAGGGTGGTTCCCCAATATTCA 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817324579072