Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3636 170 5e-40 >seq3636 Length=2448 Score = 170 bits (188), Expect = 5e-40 Identities = 246/341 (72%), Gaps = 6/341 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | || |||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 1256 TACTTAAAGAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 1198 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| |||||| | | |||||||||||| ||||||||||| |||||| | Sbjct 1197 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 1138 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT-GCAGG 177 | | || ||||||| | | ||| |||||| | || |||| | Sbjct 1137 AAAACAAATTAAAGCTCAACTTTATAAATTTTTTCAAAACTGAAAAACTTGAGTATAAAT 1078 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | ||||||| ||| || || | | |||| || |||| ||| ||||| | | Sbjct 1077 AGAGGATAATGGAATTTCTATTGGAGGGATAAAATATGTTGATAATAGAAGGAAGATCGA 1018 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 |||||||| | |||| | || |||||||||||| ||||||| |||||||| | Sbjct 1017 GAGCGAAGGCAATTATCTGG-GTATATACTGACACTGAGAAACGAAAGCTTGGGGAGCGA 959 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 || |||||||| |||| ||||||||| || ||||||||||| Sbjct 958 ACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGATGA 918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203017679104