Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950815.1_202016-12-27] 15,153 sequences; 47,142,494 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq3955 156 1e-35 >seq3955 Length=2219 Score = 156 bits (172), Expect = 1e-35 Identities = 311/451 (69%), Gaps = 11/451 (2%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||||||||||| ||||||||| ||||| ||| |||| ||||| || || | Sbjct 1240 AGACCCGAAACCGAGTGATCTAACCATGAACAGATTGAAAAATAGGTAAAACTATTTGAA 1299 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||||||| Sbjct 1300 GGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGCT 1359 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || |||||| ||| |||||||||| || ||||| ||||| | |||| || | | | | Sbjct 1360 AATCAAACTCGGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGCATTTAAAAGC 1419 Query 214 ACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGC 273 | ||||||||||||| | ||||||||| | | |||||| ||| || Sbjct 1420 TTTTTTTGGGGTAGAGCACTCATTGAGCTAGGGGG-CGTAAAAACTTACTGAACTCTTAG 1478 Query 274 AAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTG 333 ||||||||||| || | | ||| || || | || ||||||||| | Sbjct 1479 AAACTCCGAATACGAAAAAAGGTTATTTAAATAGACAGACATTAGGCGCTAAGGTCTATT 1538 Query 334 CCCGAGAGGAGAAGAATCCGGACT-ATCAGCTAAGGCCCCGAAATGACA-GCTAAGTTAA 391 | ||||| || | || || | ||| ||||||| | | |||| | | |||||| || Sbjct 1539 GTCAAGAGGGAAACAGCCCAGATTGATC-GCTAAGGTCTCTAAATAATATTCTAAGTGAA 1597 Query 392 ACTAACGAAGT--CTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCAT 449 | || ||||| | || | |||| | || | || |||||||||||||||| || | Sbjct 1598 A--AAGGAAGTGAAGAAATG--ATGACAACCAGTAGGTAGGCTTGGAAGCAGCCA-TCCT 1652 Query 450 TTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||||| |||||| |||||| | ||| || Sbjct 1653 TTAAAGAAAGCGTAATAGCTCATTGGTCTAG 1683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689343974912