Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4399 251 1e-64 seq9927 107 3e-21 >seq4399 Length=1197 Score = 251 bits (278), Expect = 1e-64 Identities = 197/230 (86%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 371 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 314 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| |||| | |||||||| ||||||||| | ||||||| |||| |||||| Sbjct 313 CTCGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATGCGCATTCACAAGATT 254 Query 120 ACCCG-GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| ||| |||||| || |||||||||| |||||||||||||||||||| Sbjct 253 ACCCAAGTCCTATCGAACAAGGTTGTATACTCGTTGAACGCATCAGTGTAGCGCGCGTGC 194 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 193 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 144 >seq9927 Length=360 Score = 107 bits (118), Expect = 3e-21 Identities = 87/103 (84%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 |||||||||||||||||| |||| || ||| |||||||| ||| |||||||||| ||||| Sbjct 304 ACAAAGGGCAGGGACGTAATCAATGCAAGC-TGATGACTTGCGTTTACTAGGAA-TTCCT 247 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG 105 |||| |||| | |||||||| ||||||||| | ||||||| Sbjct 246 CGTTCAAGATTGAAAATTGCAACAATCTATCCCTAGCACGATG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751918240445