Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq7385 266 1e-68 >seq7385 Length=553 Score = 266 bits (294), Expect = 1e-68 Identities = 362/502 (72%), Gaps = 41/502 (8%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 491 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGCCTACACAAGCGGTGGAGCATGTGGTT 432 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG-ACATCCTCTGACCCCTCTAGAG 125 |||||||| ||||| ||||||||||||| ||||| | || | || Sbjct 431 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTGCAAAT-----------TTTA-TT 384 Query 126 ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGT 185 ||| | ||| | | ||||| | ||||||| |||||||||||||| Sbjct 383 ATAAAATTTT-----------ATAATAAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGT 335 Query 186 GTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--T 243 || |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 334 GTTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTATTT 275 Query 244 CATTAAGTT------GGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 ||| | || ||||||||| | || | ||| | | |||||||| || Sbjct 274 TATTTATTTAAATAAAAGCACTCTAATAAAAATGTCAATGATAGGTTGAAGGAAGGTAGG 215 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || || Sbjct 214 GATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAA 156 Query 358 --TACAAAGGGCAGCGA-----AACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCA 410 ||||| | | || | || | | ||||||| | |||| | ||| | Sbjct 155 TTTACAATGAGAGGCAAGAATGAATAAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTA 97 Query 411 GTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||| | | |||||||||| | |||||||| |||||||||||||||||| ||| | Sbjct 96 GTTCGGATTATGGGCTGCAACTCGCCCATATGAAGTTGGAATCGCTAGTAATCGCAGAAC 37 Query 471 AGCATGCTACGGTGAATACGTT 492 |||||||| ||||||||| ||| Sbjct 36 AGCATGCTGCGGTGAATATGTT 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503831206080