Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3514 111 6e-22 >seq3514 Length=1650 Score = 111 bits (122), Expect = 6e-22 Identities = 326/493 (66%), Gaps = 21/493 (4%) Strand=Plus/Plus Query 56 ATTCGGAGTTTGGTTGAT-TTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTA 114 ||||||||||| || ||| ||||| || | ||||||||| || ||||||||| Sbjct 774 ATTCGGAGTTTCTAAGAGGTTCAGTAAGTTTTTACGCCCCCTAGCTCAATGAGTGCTCTA 833 Query 115 CCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCA 174 || || || || | ||| || | ||| |||||| ||| ||||||||||| Sbjct 834 CCCCCA--AAAAAGTTTTAAATGCTCTACTTCAATAGATTTCGCGGAAAACCAGCTATCT 891 Query 175 CGAAGTTTGATT-GGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAA 233 | ||||||||| | |||||||| |||| ||||| ||||| || | ||| | || | Sbjct 892 CCGAGTTTGATTAGCCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACACAT 951 Query 234 GTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT-AGATCAC 292 ||| ||||| ||||||| || ||||| ||||| ||| ||||| | ||||||| Sbjct 952 GTGAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCAATCTGTTCATGGGTAAGATCAC 1011 Query 293 TTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGG 352 | | |||||||||| | | ||| | | | | | || ||| | || ||||| Sbjct 1012 TCGGTTTCGGGTCTTATTTTTATAACTTAAAAGGCATTTTAAAACTTGTGTTATCTACGC 1071 Query 353 CTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAG 412 ||||| |||| || || | | || ||||| || ||| |||| | |||||| Sbjct 1072 CTACCTTTATAAAATTAAGCTTGCTATA-AAAATAAACTTGCTGGCCCATTATGCAAAAG 1130 Query 413 GCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGT 472 | || | ||||| | || ||||| || ||| | |||| | || || Sbjct 1131 GTACACTGTCACTT--TA-ATAAAA--------AGTTCCAATTGATTATTAACATTAAGT 1179 Query 473 TTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGT 532 |||| | | ||||||| | | | | | ||||||||||||| | || |||||||| Sbjct 1180 TTCA-GAATTATTTCA---AACTCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGT 1235 Query 533 CCGCTATCGGTCA 545 | |||||||||| Sbjct 1236 TCACTATCGGTCA 1248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817396010752