Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3514 78.8 2e-12 >seq3514 Length=1650 Score = 78.8 bits (86), Expect = 2e-12 Identities = 211/307 (69%), Gaps = 18/307 (6%) Strand=Plus/Plus Query 46 GTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCC 105 ||||| ||||||| |||| ||||| | |||||| ||| ||| || ||||| | | Sbjct 956 GTTCGATCCTCCAAATAGTT-TTACCTATT-TTTCAATCTGTTCATGGGTAAGATCACTC 1013 Query 106 GGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGC 165 ||||| ||||||| || | || | | | | ||| ||| | | || |||||| Sbjct 1014 GGTTT-CGGGTCTTATTTTTATAACTTAAAAGGCATTTTAAAACTTG-TGTTATCTACGC 1071 Query 166 CTCCCCT-ATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATACAAAA 223 || || | || |||||||| || | | ||||||| | |||| |||||||| ||||| Sbjct 1072 CTACCTTTATAAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATGCAAAA 1129 Query 224 GGTACGCAGTCACCC-AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGAT 282 ||||| | ||||| || ||| | ||| | || || | ||| ||||||| || Sbjct 1130 GGTACACTGTCACTTTAATAAAAAGT--TCCAATTGATTATTAACATTAAGTTTCAGAAT 1187 Query 283 CTATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAGTTCACTA 341 ||||||| | || |||||||| | ||||||| | || ||||| |||||||| Sbjct 1188 -TATTTCAAAC-----TCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGTTCACTA 1241 Query 342 TCGGTCA 348 ||||||| Sbjct 1242 TCGGTCA 1248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241460655232