Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq4399 233 4e-59 seq9927 107 4e-21 >seq4399 Length=1197 Score = 233 bits (258), Expect = 4e-59 Identities = 211/262 (81%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 72 CTTCTTAG-AGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||| | ||||||| | || | ||| || | ||||||| ||||||||||||||||| Sbjct 109 CTTCTTTGGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCT 168 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 169 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATA 228 Query 188 TCACCTTGGCCGGAAGGTC-TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 |||||| || ||| | ||||||||||||| || ||||||| |||||||| Sbjct 229 CAACCTTGTTCGATAGGACTTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGATT 288 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||| | |||| |||||||||| |||||||| ||| ||||||||| || || Sbjct 289 GTTGCAATTTTCAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATT 348 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 349 GATTACGTCCCTGCCCTTTGTA 370 >seq9927 Length=360 Score = 107 bits (118), Expect = 4e-21 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||||| |||||||| |||||||| | |||| |||||||||| |||||||| ||| Sbjct 206 TCGTGCTAGGGATAGATTGTTGCAATTTTCAATCTTGAACGAGGAATTCCTAGTAAACGC 265 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 ||||||||| || ||||||||||||||||||||||| Sbjct 266 AAGTCATCAGCTTGCATTGATTACGTCCCTGCCCTTTGT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947093695744