Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4886 426 5e-117 seq6836 168 2e-39 >seq4886 Length=1039 Score = 426 bits (472), Expect = 5e-117 Identities = 384/466 (82%), Gaps = 25/466 (5%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 ||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 460 TTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATCA 401 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 400 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTCA 341 Query 128 GCCCGCG---AAGGAC---CTTAACGCCAGAAAATGGT--CGGTGAAGACC----AGTTC 175 ||||| ||| || |||| | |||| || | | || ||| |||| Sbjct 340 -CCCGCACAAAAGCACAGGCTTACATCTAGAACTAGGCGCCCGCGAGGACGGGCTAGTTG 282 Query 176 CG-CTTCATTG-ATTAAGTaaaaaaaCGATAAGG-GTAGTGGTATTTCAC--TTGCGCCG 230 | | |||| | |||||||||||| | || || ||||||||||||||| ||| || | Sbjct 281 CTACATCATGGTATTAAGTAAAAACAACATTAGAAGTAGTGGTATTTCACGGTTG-GCAG 223 Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 | | ||| |||||||||||||||| |||||||||||||| || |||||||||||| Sbjct 222 AGCCT--TCCAACTTATTCTACACCTCCTAAGTCATTTCACAAC-TCAGACTAGAGTCAA 166 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 165 GCTCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTT 106 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTC-GTTAATCCATTCATGCGCGTCACTAA 409 ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 105 CGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTTATTCCATTCATGCGCGTCACTAA 46 Query 410 TTAGATGACGAGG-CATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 |||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 45 TTAGAT-ACGAGGCCATTTGGCTACCTTAAGAGAGTCATAGTTACT 1 >seq6836 Length=621 Score = 168 bits (186), Expect = 2e-39 Identities = 98/101 (97%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 621 CCTTAAGACAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCACTT 562 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||| ||||||| Sbjct 561 TGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635016481504