Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq8282 379 6e-103 seq6588 113 1e-22 >seq8282 Length=466 Score = 379 bits (420), Expect = 6e-103 Identities = 344/422 (82%), Gaps = 21/422 (5%) Strand=Plus/Plus Query 96 GCCTTCCTTGGATGTGGT-AGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC-TAAT 153 |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||| |||| Sbjct 1 GCCTTCCTTGGATGTGGTTAGCCGTTTCTAAGGCTCCCA-TCCGGAATCAAACCCCTAAT 59 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 ||||||||||||||| || |||||||||||| |||||||||||| |||| ||||||||| Sbjct 60 TCCCCGTTACCCGTTAATGCCATGGTAGGCCCATATCCTACCATCCAAAGCTGATAGGGC 119 Query 214 AGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAAT 273 ||||| | | || | ||| | ||| |||| | || ||||||||||| | Sbjct 120 AGAAACTCAATCGATTTACCGCA--CAAAAG----TGCGGTCCGCACAGTTATTATGACT 173 Query 274 CACCA-AGGAGC--CCCGAAGG--GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG 328 || || | | | ||||||| || ||||||| ||||||||||| | ||| |||| Sbjct 174 CAACACAATACCAGCCCGAAGACTGCATTGGTTTCA-ATCTAATAAATGCTACCCGTCCG 232 Query 329 A-----AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383 | ||| ||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct 233 ACAAGCAGTTGGGTATTGATGCATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAG 292 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 |||||||||||| | || || ||||||||| ||||||||||||||||||||||| ||| | Sbjct 293 TAAGGTACTATCGAGTAGACTATAACTGATATAATGAGCCATTCGCAGTTTCACAGTACA 352 Query 444 GA-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 353 AAGTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGC 412 Query 503 AG 504 || Sbjct 413 AG 414 >seq6588 Length=650 Score = 113 bits (124), Expect = 1e-22 Identities = 110/135 (81%), Gaps = 5/135 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | || ||||| | || |||||||||||| ||| Sbjct 133 GTCCTCATTCCAATTGCCCGACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCATTACA 75 Query 60 TCCCCGTGTCGGGA-TTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT-GGTAGCC 117 |||| ||||| ||| |||| |||||| |||||||| |||||||||||||||| ||||||| Sbjct 74 TCCCTGTGTCAGGATTTGGTTAATTTACGCGCCTG-TGCCTTCCTTGGATGTGGGTAGCC 16 Query 118 GTTTCTCAGGCTCCC 132 |||||| | |||||| Sbjct 15 GTTTCTAATGCTCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510230487808