Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950835.1_202016-12-27] 11,223 sequences; 35,561,321 total letters Query= NC_027197.1 Length=3753 Score E Sequences producing significant alignments: (Bits) Value seq931 102 2e-18 seq3704 84.2 5e-13 >seq931 Length=7814 Score = 102 bits (112), Expect = 2e-18 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 1641 AAGACCATCTGTGACGAAGCTGGTTTCCCAGTTGACCAAAAGTACAAGACGCCGCAACTG 1700 |||||||||||||| |||||||| ||| | || ||||||||||||||||| || ||| | Sbjct 354 AAGACCATCTGTGATGAAGCTGGCTTCGCCGTGGACCAAAAGTACAAGACACCACAAACG 413 Query 1701 GCTCGTACCACTGTCTTGGTCTCTTCCAACTTCACCATC 1739 |||||||| || || ||||| || ||||| ||||||| Sbjct 414 GCTCGTACGACCGTGTTGGTGACTAGCAACTACACCATC 452 >seq3704 Length=1542 Score = 84.2 bits (92), Expect = 5e-13 Identities = 200/296 (68%), Gaps = 16/296 (5%) Strand=Plus/Plus Query 1452 CCTCACATCTGGCTTACTGG-TACTCCTGGTTCTGGCAAGTC-----TGCCATCTTGCAG 1505 |||||||||||||| ||| ||| | ||| | | |||| | |||| |||| Sbjct 238 CCTCACATCTGGCTACATGGATACGC-TGGAACAGACAAGACCGCTTTGCCCTCTT---- 292 Query 1506 GTCATCTATCCTGCGTATTACAACAAGAATCTGGACAACCGTTTCTTCGACTTGTACCAG 1565 |||||||||| ||| ||| || |||||| |||| || | || | | | Sbjct 293 -TCATCTATCCCAGCCATTCCAAGAAAAATCTGAGCAACAAGTTTTGGGATCTCTTTGAT 351 Query 1566 CCAAAAGTGCACACGCACATGCTTCTTCAAGATGTCGATCACACGACGGT-TGAAAAGT- 1623 ||||| ||||| ||||||| | || | |||| |||| || || | | || | || Sbjct 352 CCAAAGGTGCATACGCACACGATTTTGGAAGACCTCGACTAC--GATGCTATGGATCGTC 409 Query 1624 TGGGAGTCCAGTTCCTAAAGACCATCTGTGACGAAGCTGGTTTCCCAGTTGACCAAAAGT 1683 | || || | || || || || ||||||| ||||| || || | || |||||||||| Sbjct 410 TTGGTATCAACTTTCTCAATACGGTCTGTGATGAAGCCGGCTTTGCTGTCGACCAAAAGT 469 Query 1684 ACAAGACGCCGCAACTGGCTCGTACCACTGTCTTGGTCTCTTCCAACTTCACCATC 1739 ||||||| |||||| | || || |||||||| | ||| | ||||| ||| ||| Sbjct 470 ACAAGACACCGCAAATCGCGCGAACCACTGTTCTTGTCACAAGCAACTACACTATC 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11896139551010