Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq51513 205 4e-50 seq47121 95.1 5e-17 seq24163 75.2 5e-11 >seq51513 Length=351 Score = 205 bits (226), Expect = 4e-50 Identities = 149/171 (87%), Gaps = 5/171 (3%) Strand=Plus/Plus Query 517 ATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 ||||||||||| ||| ||||| || ||||||||| ||||| | |||||| || Sbjct 1 ATCGACCGATCATGAAC-CTTCGTGGTGAAAGATTTGAGTTTGAGCACATATGTTGGTAC 59 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 60 CCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCT 119 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct 120 CGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 170 >seq47121 Length=380 Score = 95.1 bits (104), Expect = 5e-17 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 405 CGGCCCGTC-TTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-C 462 || |||||| ||| |||||||||||||||||||||||| | |||||||||| |||||| Sbjct 187 CGTCCCGTCCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTGTTAGGGTGTGG 128 Query 463 AAACCCGTGCGCGTAATGAAAGTGAA 488 |||||| ||||| ||||||||| || Sbjct 127 AAACCCCAGCGCGGAATGAAAGTAAA 102 >seq24163 Length=642 Score = 75.2 bits (82), Expect = 5e-11 Identities = 75/96 (78%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 53 TGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGAC 112 ||| |||||||| | || | || |||||||| | ||||||||||||| |||| |||| Sbjct 396 TGGTAATGCAGCGC-AAGTAGGTGGTAAATTCCATCTAAAGCTAAATGTTGGTGCAAGAC 338 Query 113 CGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 |||||||| |||||| || | ||||||| |||| Sbjct 337 CGATAGCGAACAAGTGCCGTAAGGGAAAGATCAAAA 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078700087100