Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq21288 214 5e-53 >seq21288 Length=702 Score = 214 bits (236), Expect = 5e-53 Identities = 259/349 (74%), Gaps = 14/349 (4%) Strand=Plus/Minus Query 157 CAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACG 216 |||| | ||||||| |||||||||||||||| |||| ||||| |||||| ||| |||| Sbjct 697 CAGGCGTTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTTGGTTAAATCCTTTAACG 638 Query 217 AGCGCAACCCTTAAGCTTAGTTGCCATC--ATTAAGTTGG------GCACTCTAAGTTGA 268 |||| ||||| || |||||||| || ||| | || ||||||||| | Sbjct 637 AGCGTAACCCCTATTGTTAGTTGCTATTTTATTTATTTAAATAAAAGCACTCTAATAAAA 578 Query 269 CTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGAT 328 || | ||| | | |||||||| |||| |||||||| || ||||| ||||||||| Sbjct 577 ATGTCAATGATAGGTTGAAGGAAGGTAGGGATGACGTCAAGTCTTCATGGCCCTTATGAG 518 Query 329 TTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCG----AGGTC 384 |||||||||||||||||||||||| | ||||| | | || | | | | | Sbjct 517 TTGGGCTACACACGTGCTACAATGATAATTACAATGAGAGGCAATAATGATTAAAAATTG 458 Query 385 AAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAA 444 |||||||| ||| || | || |||||||||| | | |||||||||| | ||||||| Sbjct 457 GAGCAAATCTTTAAAAATTAT-CTTAGTTCGGATTATGGGCTGCAACTCGCCCATATGAA 399 Query 445 GCTGGAATCGCTAGTAATCGTA-GATCAGCATGCTACGGTGAATACGTT 492 | |||||||||||||||||| | || ||||||||| ||||||||| ||| Sbjct 398 GTTGGAATCGCTAGTAATCGCAGGACCAGCATGCTGCGGTGAATATGTT 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503088545920