Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq53997 311 3e-82 seq33339 107 6e-21 >seq53997 Length=336 Score = 311 bits (344), Expect = 3e-82 Identities = 218/245 (89%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGAAACGGC 237 |||| | ||||||||| ||| || ||||||||||||||| ||| || || | | Sbjct 95 TCATGGTATAAGTAAAACAACATTAGAAGTAGTGGTATTTCACGGTTG-GCAGAGCC--C 151 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 152 TCCCACTTATTCTACACCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCAAGCTCAAC 211 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 212 AGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGA 271 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 272 CAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGA 331 Query 418 CGAGG 422 ||||| Sbjct 332 CGAGG 336 >seq33339 Length=504 Score = 107 bits (118), Expect = 6e-21 Identities = 83/95 (87%), Gaps = 3/95 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAG-TCCCCCTTAGGACACCTGCGTTAT 65 |||||| |||||| |||||||||||||| |||| || || |||||||||||| ||||| Sbjct 93 CTTTTGTTCTACAT-AGATTTCTGTTCTCATTGAGCTCACCTTTAGGACACCTGTGTTAT 35 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||| |||||||||||||||||||||||||||| Sbjct 34 CATTTA-CAGATGTGCCGCCCCAGCCAAACTCCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634209036096