Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950855.1_202016-12-27] 60,602 sequences; 48,855,945 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4160 307 8e-79 seq7871 217 1e-51 >seq4160 Length=1787 Score = 307 bits (340), Expect = 8e-79 Identities = 920/1394 (66%), Gaps = 48/1394 (3%) Strand=Plus/Plus Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||||||||| | || || || ||| || ||||||| ||||| || || | || || Sbjct 168 GAACTCGCCAGCGAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTC 227 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 ||||||| || || || ||||| || || || ||||| || |||| || || ||||| Sbjct 228 GTTGTTGCCGAGGATCTGCGCAGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTT 287 Query 65554 TCGCAATCCGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 |||| |||| | | | | | ||| || || |||||| ||| | | Sbjct 288 GCGCACGCCGTACTGCGCGACGCTCGCCTTGA-GCG---CGGCCCAGTCCCAGA--GACC 341 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 ||||| | | ||| |||||| || || | | | || | || | || |||| Sbjct 342 CGACGTCGGCGTG-ACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTCACGGGCGAAC 400 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT-GGTCTCGAGTGCG 65728 | | | || ||||| || | |||| || || | || | || ||| | ||| Sbjct 401 CCTCGTAGCTGCCGTACGGGCCGTGCTCCCGCGCGAGCTC-CATCGAGGCCTCCATGGCG 459 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTAC 65788 |||| || | |||||||| ||| || || || || ||||| ||||||||| || Sbjct 460 CCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCGTCGCTCTCGAAC 519 Query 65789 GGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 | | || ||||| |||| || | ||| || ||||| || || || || ||||| || || Sbjct 520 G-CGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGGGCG 578 Query 65848 ATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 || |||| ||| || |||| |||| || | |||||||| ||||| ||||| | Sbjct 579 GTGGCGCAGGTTGCTGCG-CTCGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATGACCT 637 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAAATG 65964 |||| ||||| || || || | ||| |||| | ||| ||| ||||| Sbjct 638 TGTTCAGGTTGCGCGTGACGACCTTGGTGAT--GTCGTAGAGCTTCTGGAAGTCAAAGGT 695 Query 65965 TTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 || | || |||| ||||||||||| || || | || |||||||| Sbjct 696 CTT--GTCG-TCGGT------------CACAAACTTGGACAGCGCGATGGACGCGAGGTT 740 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||| || || | ||| || || | || ||||||| | ||| ||| || || || | Sbjct 741 GCACACCGCGACCTCATCGGGCGACGTGTACTCGAGCACCTCGCAGCAGAGGTTGCTCGA 800 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 ||| || ||||| | ||||| || || |||||| ||||| | |||||||||| ||| Sbjct 801 GCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGCAT 860 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA-GC-GCGTGCC 66202 |||||| ||||| ||||| | || ||||| | ||| ||| ||| || || ||| || Sbjct 861 GTACGGCGTGCCTGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGCTGCTGCGCGCG 920 Query 66203 TTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGA 66261 | ||| | | | ||| | || | ||| ||||| || | ||| || ||||| Sbjct 921 G--ATCGT-CTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTC 977 Query 66262 TTCACCCCATACTTCGGACAGA--CATGGACACTTGTGTGGACACATCAGCGACCAATCA 66319 || ||||| | ||| ||| | || || || || || | ||| ||| || Sbjct 978 GTCGCCCCA--CGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCG 1035 Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 || | || || || ||| || ||||| || ||||| | |||||||||||||| Sbjct 1036 CCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCA 1095 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 || || || ||| ||| ||||||| || || | ||| |||||||| ||||||||| Sbjct 1096 CGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCCAGGAACTCGAAGATGTCG 1155 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 || ||||| || |||||||| || |||||||||||| | || |||||||| || |||||| Sbjct 1156 GCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCG 1215 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 |||||||| || | |||||||||||||| ||| || ||||| ||||| || ||| Sbjct 1216 ACGTAGCGCGCCGTGTCGTTGAAGACACGCAGCATGGGCACGAGGCCGTTCGACGAGCCG 1275 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACC 66618 || |||||| |||| || | || || || || | ||| || | | || || || Sbjct 1276 TTCGTGCCGCGGATGTACGA-GTTGGTCGCGCGGATGTTGTGCACGCTGACGCCGATGCC 1334 Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGA 66678 || ||| ||| |||||| || || | | || | | ||||| || || || Sbjct 1335 GCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATCGA 1394 Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738 ||| |||| |||| || ||| |||| || || || || || ||| | || Sbjct 1395 GTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCCGCGTT 1454 Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798 ||| || || || || |||||||| ||| | | |||||||| | ||||||||||| Sbjct 1455 GAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCTCGAG 1514 Query 66799 GACAGCATCAATGT 66812 | || ||||||| Sbjct 1515 CGCGGCGTCAATGT 1528 >seq7871 Length=1281 Score = 217 bits (240), Expect = 1e-51 Identities = 600/892 (67%), Gaps = 37/892 (4%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 |||||||| | ||||| ||| || | | || | |||| |||||||| ||||| || Sbjct 344 CGTTTCGTGCTCTTCCCGATCCAGGAGAACGAGGTGTGGCAGATGTACAAGAAGGCTGAG 403 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTT-GTCCAAAGACATGAATGACTGGGAGCG 61172 || ||||||||| | |||||| ||||| | || || ||| | || ||||||| || Sbjct 404 GCGAGCTTCTGGACCGCCGAGGAGATCGATCTCGTGCAT-GACCTCAAGGACTGGG-GCA 461 Query 61173 TTTATCGAGCGGTGAACAA----CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTT 61228 | | ||| ||| | || || || || || || | ||||| || || || Sbjct 462 ---ACCTCACGGACAACGAGCGCCACTTTATCAAGCACGTCCTCGCGTTTTTCGCGGCGA 518 Query 61229 CGGACGGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAG-GAGGTGCAAGTGT 61285 |||||||||||||| ||||| | | |||| ||| |||| |||||||| || Sbjct 519 GCGACGGTATCGTCAACGAGAACCTCGCGATGAAC--TTCA-GCAGCGAGGTGCAGGTCC 575 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | ||||||||||| ||||| || |||||||| ||||| ||||| ||||||||||| ||| Sbjct 576 CTGAGGCGCGTTGCTTCTATGGATTCCAGATCGCCATTGAGAACATCCACTCGGAGGTGT 635 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAAT 61404 || | ||||| || |||||||||| ||| | | | | | |||| | | || Sbjct 636 ACTCGCTGCTCATTGACACGTACATCAAGGACCAGACTG-AGAAGAACCACCTTCTCCGC 694 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-AC 61463 ||||||||||| || ||| ||| || ||| ||| | ||||| |||| ||| | || Sbjct 695 GCCATCGAGACCATCCCGTGCGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGAC 754 Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | | | || | |||| ||| || | | || || || | ||||||||| | || Sbjct 755 TCGCGCCGC-GCGGCTTTTGCTGAGCGCATCGTTGCGTTCGCTGCTGTCGAGGGTATCTT 813 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 ||| || ||||| | | ||||| ||| | ||||| ||||| || ||||| || || Sbjct 814 CTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCT 873 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 | |||| || ||| | || || ||||| |||||| | || || || || || | | Sbjct 874 CAGCTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTCCACTGCGACTTCGCGTGTCT 933 Query 61644 GC--TATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTT 61701 || || || || ||| | | || | ||| ||||| ||| | ||||| || Sbjct 934 GCTGTACTCGAA-GCT-TGTCAACAAGC-TCC--CGGAGTCGCGCATCCACGAGATCATT 988 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATT--TC--TGACTGACGCTTTGCCCGTCTCACT 61757 || || || || |||| || |||| || || |||| ||||| || ||| || Sbjct 989 CGCGATGCTGTCGCTATTGAGAAGGAGTTCGTCCAGGACT--CGCTT--CCGGTCGAGCT 1044 Query 61758 CATCGGCATGAA-TTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 |||||||||||| | || | || |||| ||||| ||||| || |||||| || || Sbjct 1045 CATCGGCATGAACTCGTCG-CTCATGTGCCAGTACATTGAGTTCTGTGCCGATCGCCTCC 1103 Query 61817 TGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACA 61876 | || | ||| | |||||| || | ||||| || || | ||||||| Sbjct 1104 TCCACGCGCTTGGTGTCGCCAAGATCTACAAGGTGTCGAACCCGTTCGACTGGATGGACA 1163 Query 61877 TGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 |||| ||||| | |||||||| || || |||||||| || || ||||| || Sbjct 1164 TGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTA 1215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397274361493280