Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq2051 122 3e-25 >seq2051 Length=3645 Score = 122 bits (134), Expect = 3e-25 Identities = 330/494 (67%), Gaps = 27/494 (5%) Strand=Plus/Plus Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTAC 115 ||||||||||| || ||| ||||| || | ||||||||| || |||||||||| Sbjct 2587 ATTCGGAGTTTCTAAGAGTTCAGTAAGTTTTTACGCCCCCTAGCTCAATGAGTGCTCTAC 2646 Query 116 CTCCGGGAAGAAACACGCG---ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTAT 172 | | || ||| | | ||| || | |||| |||||| ||| |||||||||| Sbjct 2647 CCC----AAAAAAAGCTTTTAAATGCTCTACTTCAATG-ATTTCGCGGAAAACCAGCTAT 2701 Query 173 CACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTA 232 | | ||||||||| ||||||||| |||| ||||| ||||| || | ||| | || | Sbjct 2702 CTCCGAGTTTGATTAGCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACACA 2761 Query 233 AGTGGGTTCGGTCCTCC-ACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCA 291 ||| ||||| |||||| | || ||||| ||||| ||| ||||| ||||||| Sbjct 2762 TGTGAGTTCGATCCTCCAAAATAGTTTTACCTATTTTTCAATCTGTTCATGGTTAGATCA 2821 Query 292 CTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACG 351 || | |||||||||| | | ||| | | | | | || ||| | || ||||| Sbjct 2822 CTCGGTTTCGGGTCTTATTTTTATAACTAAAAAG-CATTTTAAAACTTGTGTTATCTACG 2880 Query 352 GCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAA 411 |||| | | |||| || || | | || ||||| || ||| |||| | ||||| Sbjct 2881 CCTACTTTATA-AAATTAAGCTTGCTATA-AAAATAAACTTGCTGGCCCATTATGCAAAA 2938 Query 412 GGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGG 471 || || | ||||| | || ||||| || ||| | |||||| || | Sbjct 2939 GGTACACTGTCACTT--TA-ATAAAA--------AGTTCCAATTGATTGTTAACATTAAG 2987 Query 472 TTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTG 531 ||||| | | ||||||| | | | | | ||||||||||||| | || ||||||| Sbjct 2988 TTTCA-GAATTATTTCA---AACTCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTG 3043 Query 532 TCCGCTATCGGTCA 545 | | |||||||||| Sbjct 3044 TTCACTATCGGTCA 3057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817362621440