Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2051 86.0 2e-14 >seq2051 Length=3645 Score = 86.0 bits (94), Expect = 2e-14 Identities = 240/349 (69%), Gaps = 22/349 (6%) Strand=Plus/Plus Query 46 GTTCGGTCCTCCAGT-TAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 ||||| ||||||| |||| ||||| | |||||| ||| ||| || |||||| | Sbjct 2767 GTTCGATCCTCCAAAATAGTT-TTACCTATT-TTTCAATCTGTTCAT-GGTTAGATCACT 2823 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164 |||||| ||||||| || | |||| | | | ||| ||| | | || ||||| Sbjct 2824 CGGTTT-CGGGTCTTATTTTTATA-ACTAAAAAGCATTTTAAAACTTG-TGTTATCTACG 2880 Query 165 CCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATACAAAA 223 ||| | ||| |||||||| || | | ||||||| | |||| |||||||| ||||| Sbjct 2881 CCTACTTTATAAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATGCAAAA 2938 Query 224 GGTACGCAGTCACCC-AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGAT 282 ||||| | ||||| || ||| | ||| | || |||| ||| ||||||| || Sbjct 2939 GGTACACTGTCACTTTAATAAAAAGT--TCCAATTGATTGTTAACATTAAGTTTCAGAAT 2996 Query 283 CTATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAGTTCACTA 341 ||||||| | || |||||||| | ||||||| | || ||||| |||||||| Sbjct 2997 -TATTTCAAAC-----TCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGTTCACTA 3050 Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 390 ||||||| | | | || || || |||| |||| |||| || |||| Sbjct 3051 TCGGTCATTAATTCTTA--AAGGTTTTGAGGGTGGTTCCCCAATTTTCA 3097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241437847040