Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq2051 152 8e-35 >seq2051 Length=3645 Score = 152 bits (168), Expect = 8e-35 Identities = 191/261 (73%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 ||||||||| ||||| |||||| ||| |||||| | | || |||| | | Sbjct 922 CTTAGATGCTTTCAGTAATTATCCAAAATAAATTTAGCTACTCGGCGATGCTTT----AA 977 Query 77 TACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTC 136 ||||| | | |||||||| ||| || || |||||||||||||||| | || | || Sbjct 978 AACAACCGATACACCAGAGATTTACCCTTCTCGGTCCTCTCGTACTAGAGTTAGATTCTT 1037 Query 137 TCAAATTTCCTACGC--CCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACC 194 ||| ||| | | | |||||| ||| ||||||||| ||||||||| |||| Sbjct 1038 TCATTTTTTAAAAATATCTATAGAAGATAGGAACCAAACTGTCTCACGACGTTCTAAACC 1097 Query 195 CAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCA 254 || ||| ||| || ||||| | ||||||||||| ||||||||| |||| ||||||| ||| Sbjct 1098 CAACTCACGTACCACTTTATTCGGCGAACAGCCGAACCCTTGGAACCTTCTTCAGCTCCA 1157 Query 255 GGATGAGACGAGCCGACATCG 275 ||||| || ||| |||||||| Sbjct 1158 GGATGTGATGAGTCGACATCG 1178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780701214160