Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq4998 214 5e-53 >seq4998 Length=1126 Score = 214 bits (236), Expect = 5e-53 Identities = 223/288 (77%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 |||| |||||| ||||||||| ||| | ||||||| |||| ||| |||| | Sbjct 287 GCGTAAGATTAGGTAGTTGGTAGTTTAAAAGACTACCAAGCCGACTATCTTTAGCTGGTT 228 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 ||| || ||||| |||||||||| |||||||||||| ||||||| | ||||||| Sbjct 227 TGAAAGAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACT-TTTTTAAAGGCAGC 169 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||||||||| ||| |||||| || ||||| |||| |||||| || ||||| || ||| Sbjct 168 AGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCAGCAATACCAAGTGAGTGAAGAA 109 Query 341 GGC-CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAA 399 ||| | ||| |||||||||| || | ||||| || |||||| |||||| | || ||| Sbjct 108 GGCTAATTAGGTTGTAAAGCTCTTTCATTAAGGAGGAAAATGACAGTACTTAAAGAAGAA 49 Query 400 GCCCCGGCTAACTA--CGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 445 | ||||||||| || |||||||||||||||||||||||| ||||| Sbjct 48 GTCCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGTGGGGC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497404413440