Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950875.1_202016-12-27] 13,060 sequences; 37,817,292 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq2051 138 4e-30 >seq2051 Length=3645 Score = 138 bits (152), Expect = 4e-30 Identities = 313/456 (69%), Gaps = 21/456 (5%) Strand=Plus/Minus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCT-GG 92 |||||||||||| ||||||||| ||||| ||| |||| ||||| || | || Sbjct 2836 AGACCCGAAACCGAGTGATCTAACCATGAACAGATTGAAAAATAGGTAAAACTATTTTGG 2777 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| ||||| ||| ||| | ||||| || ||||| ||||| |||| ||||||||| Sbjct 2776 AGGATCGAACTCACATGTGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGC 2717 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTAT 212 ||| |||||| ||| |||||||||| || ||||| | ||| | |||| || | | | Sbjct 2716 TAATCAAACTCGGAGATAGCTGGTTTTCCGCGAAATC-ATTGAAGTAGAGCATTTAAAAG 2658 Query 213 CACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTG 272 | | ||||||||||||| | ||||||||| | | |||||| ||| || Sbjct 2657 CTTTTTTTGGGGTAGAGCACTCATTGAGCTAGGGGG-CGTAAAAACTTACTGAACTCTTA 2599 Query 273 CAAACTCCGAATGCGCATCA--GT--TTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGT 328 ||||||||||| || | | || |||| || || | || |||||||| Sbjct 2598 GAAACTCCGAATACGAAAAAAGGTAATTTA----AATAGACAGACATTAGGCGCTAAGGT 2543 Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACT-ATCAGCTAAGGCCCCGAAATGACA-GCTAA 386 | | | ||||| || | || || | ||| ||||||| | | |||| | | |||| Sbjct 2542 CTATTGTCAAGAGGGAAACAGCCCAGATTGATC-GCTAAGGTCTCTAAATAATATTCTAA 2484 Query 387 GTTAAACTAACGAAGT--CTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 || ||| || ||||| | || | |||| | || | || |||||||||||||||| Sbjct 2483 GTGAAA--AAGGAAGTAAAGAAATG--ATGACAACCAGTAGGTAGGCTTGGAAGCAGCCA 2428 Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || |||||||| |||||| |||||| | ||| || Sbjct 2427 -TCCTTTAAAGAAAGCGTAATAGCTCATTGGTCTAG 2393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689379338240