Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq14291 273 9e-71 >seq14291 Length=537 Score = 273 bits (302), Expect = 9e-71 Identities = 244/307 (79%), Gaps = 29/307 (9%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||||||||||| | |||||||||| |||||| | Sbjct 201 CGTCCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTGTTAGGGTGTGGA 260 Query 464 AACCCGTGCGCGTAATGAAAGTGAACG---------------GAGGTGGGAACCCGT--- 505 ||||| ||||| ||||||||| || | ||||| |||| || | Sbjct 261 AACCCCAGCGCGGAATGAAAGTAAAGGACAGCTCAGCTGTCTGAGGTAGGAAACCTTTGC 320 Query 506 -----GAGGGTGCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAAGA 556 |||| |||| ||||||||||| ||| ||||| || ||||||||| || Sbjct 321 TTGCGGAGGTGGCACTATCGACCGATCATGAAC-CTTCGTGGTGAAAGATTTGAGTTTGA 379 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 ||| | |||||| ||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 380 GCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGA 439 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 |||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||| Sbjct 440 AACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTATA 499 Query 677 GGGGCGA 683 ||||||| Sbjct 500 GGGGCGA 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079516088000