Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq19900 120 4e-25 >seq19900 Length=356 Score = 120 bits (132), Expect = 4e-25 Identities = 171/242 (71%), Gaps = 19/242 (8%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || |||||||| ||||| | ||| | ||| Sbjct 240 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCAATTAAGCAGAGTCCT 181 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||| ||||||||||| ||| ||||||| ||| ||| | | Sbjct 180 AAGTTTTTATTAAACAGTCGCAACCCCCTATTCTGTGCCACC---------TTATT---- 134 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 |||| || || || | ||||||||||||||| | | ||||||||||| |||||| Sbjct 133 --TTCATAAG----GGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTT 80 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 | | ||||| | | | ||||||| | ||| |||| |||||||||||||||| || Sbjct 79 CAATATAGTTCTCTCATTCACCTTAGTCTACTCGACCTATTCACCTGTGTCGGTTTAGGG 20 Query 247 TA 248 || Sbjct 19 TA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694248238880