Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq3631 78.8 1e-12 seq540 73.4 6e-11 >seq3631 Length=2877 Score = 78.8 bits (86), Expect = 1e-12 Identities = 99/136 (73%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64 GCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCC 123 || |||||||| || || ||||||||||| || || |||| |||||| ||||| || Sbjct 734 GCGGGCGCTTCCTCGAGCACCTTCTGGTGGCGGCGCTGCACCGAGCAGTCGCGCTCAAAG 793 Query 124 AGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTG 183 ||||| | | ||| ||| | |||| | || |||| |||||||| || || ||| Sbjct 794 AGGTGCACGACGTTGCCGTACTTGTCGCCAAAGACCTGCAGCTCCACGTGGCGCGGCTTG 853 Query 184 GTCAGGTACTTTTCCA 199 ||||||||| |||| Sbjct 854 CGCAGGTACTTCTCCA 869 >seq540 Length=8666 Score = 73.4 bits (80), Expect = 6e-11 Identities = 123/178 (69%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 64 GCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCC 123 ||||||||| || || ||||||||||| ||||| |||| |||||| || |||| | Sbjct 2196 GCCGGCGCTGTCTCGAGCACCTTCTGGTGGCGACGCTGCACCGAGCAGTCACGGTGGTGA 2137 Query 124 AGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTG 183 ||||| | | ||| ||||| |||||| || | || | || | ||| || || || Sbjct 2136 AGGTGCACGACGTTGCCCTTGCCGTCACCGAGGATCTGAATCTCGATGTGGCGCGGCTTA 2077 Query 184 GTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGGAGC 241 | || ||| || | | ||||| | || ||||||| ||| ||| ||||||| Sbjct 2076 GACACGTAGCGCTCGATGAAGACCGTGCCGTCGCCGAACGCAGCGAGCGCCTCGGAGC 2019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735839147200