Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12565 374 3e-101 seq14896 138 4e-30 >seq12565 Length=631 Score = 374 bits (414), Expect = 3e-101 Identities = 336/411 (82%), Gaps = 23/411 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 405 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 346 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 345 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTC 286 Query 127 GGCCCGCG---AAGGAC---CTTAACGCCAGAAAATGGT-----CGGTGAAGACCAGTTC 175 ||||| ||| || |||| | |||| || || || | | |||| Sbjct 285 A-CCCGCACAAAAGCACAGGCTTACATCTAGAACTAGGCGCCCGCGAGGACGGCTAGTTG 227 Query 176 CG-CTTCATTGAT-TAAGTaaaaaaaCGATAAGG--GTAGTGGTATTTCAC--TTGCGCC 229 | | |||| | | ||||||||| ||| || ||| ||||||||||||||| ||| || Sbjct 226 CTACATCATGGGTATAAGTAAAACAAC-ATTAGGAAGTAGTGGTATTTCACGGTTG-GCA 169 Query 230 GAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA 289 || | ||||||||||||||||||||| |||||||||||||| ||| ||||||||||| Sbjct 168 GA---GCCTCCCACTTATTCTACACCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCA 112 Query 290 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTT 349 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 111 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGT 52 Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400 |||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 51 TCGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCG 1 >seq14896 Length=510 Score = 138 bits (152), Expect = 4e-30 Identities = 79/81 (98%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 453 CTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGC 512 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 510 CTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGC 451 Query 513 AGAAATCACATTGCGTCAACA 533 ||||||||||||| ||||||| Sbjct 450 AGAAATCACATTGTGTCAACA 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634831098880