Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1862 282 3e-71 seq957 178 1e-39 >seq1862 Length=4717 Score = 282 bits (312), Expect = 3e-71 Identities = 1131/1741 (65%), Gaps = 60/1741 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 |||||||||||||||||||||| || || | | | || |||||||| || ||| Sbjct 4062 TCGACCGTGAACTGGATCGCATCGGCCTTCGGTCGGCTGCGCAGGTAGTACATACCCGTC 4003 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT--TCGGCT 65195 ||||| || ||| || || || ||||| || | | | |||| | || |||||| Sbjct 4002 TTGAGACCCTTCTTCCACGCGTAAAAGTGCATGGACG-TCAGCTTGC-TGATCGTCGGCT 3945 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || | |||| || | |||||| ||||| |||||| || || || || |||| Sbjct 3944 CCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGATGTAGGCGCCGCGGTCGGCGGCCA 3885 Query 65256 TGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 | || | | | | | || | |||||||| || ||||||||| | | | || | Sbjct 3884 TATCGAGCACA-GCCTTCTGCTTGATCTCCCACACCGTCTTGTACTT-CTCCTTCACGGC 3827 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCA 65372 | || ||| | | || ||| ||||| || | |||||| | | | ||||||| Sbjct 3826 ATCCGGGATCACGCGCACGTTCTGCACTGAGCCGTGGTCGTGCAGGA-TCTGGTTACGCA 3768 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC-- 65430 | | ||| | || | ||||| || | | | || || || ||| | || Sbjct 3767 CCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATCAGGT-AC--TTGTTCACGA 3711 Query 65431 TTG-GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | | ||||||||| | || || || ||| || ||||||| ||||| || || | | Sbjct 3710 TCGTGAACTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCG 3651 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 | || ||||||| || || || || ||||| || || ||||| || |||| || || | Sbjct 3650 ACTCGTTGTTGCCGAGGATCTGCGCGGTAGACGCCGTCGGCATCGGCGCGAGCAGCAGCG 3591 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATC 65605 |||| |||| |||| | | | | || ||| || || |||||| ||| | Sbjct 3590 AGTTGCGCACGCCGTACTGCGCGACGCTGGCCTTGA-GCG---CGGCCCAGTCCCAGA-- 3537 Query 65606 GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGT 65665 || ||||| | | ||| |||||| || | || | | | || | || | ||| Sbjct 3536 GGCCGGACGTCGGCGTG-ACGCCCCACATGTCGTACTGGAAGATGCCCTTGCTCACAGGT 3478 Query 65666 GAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT-GGTCTCGAG 65724 || || | | || ||||| || | |||||| || || | || | || ||| | Sbjct 3477 GAGCCCTCGTAGCTGGCGTACGGGCCGTGCTCCTTTGCGAGCTC-CATCGAGGCCTCCAT 3419 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 ||| | || || | |||||||| ||| || || || || ||||| |||||||| Sbjct 3418 CGCGCCGAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGGCCTCGTCGCTCTC 3359 Query 65785 GTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 ||| | || ||||| |||| || | || || ||||| || || || || ||||| | Sbjct 3358 AAACG-CGTAGCCCATGAGGATGAACGCATCCGCGAGACCCTGCACGCCGATGCCGATCG 3300 Query 65844 GACGATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATA 65902 | || || |||| ||| || |||| |||| || | |||||||| ||||| ||||| Sbjct 3299 GGCGGTGGCGCAGGTTGCTTCG-CTCGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATG 3241 Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAA 65962 | || | ||||| || || || | ||| |||| | ||| Sbjct 3240 ACCTTGTTGAGGTTGCGCGTGACGACCTTGGTGAT--GTCGTACAGCTTC---------- 3193 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 || | | ||| || || || ||||||||| | || || | || |||||| Sbjct 3192 --TTGAAGTCGAA-GGTCTTGTCGTCGTTCACAAACTTCGACAGCGCGATGGACGCGAGG 3136 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||| || || | |||||| || | || ||||||| | || ||| || || || Sbjct 3135 TTGCACACCGCGACCTCGTCGGGCGACGTGTACTCGAGCACCTCACAGCAGAGGTTGCTC 3076 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 |||| || ||||| | ||||| || || |||||| ||||| | |||||||||| | Sbjct 3075 GAGCGAATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTGTACAGC 3016 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA-GC-GCGTG 66200 |||||||| ||||| ||||| | || ||||| | ||| ||| ||| || || ||| | Sbjct 3015 ATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGCTGCTGCGCG 2956 Query 66201 CCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259 | | ||| | | | ||| | || | ||| ||||| || | ||| || ||||| Sbjct 2955 CGG--ATCGT-CTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAAC 2899 Query 66260 GATTCACCCCATACTTCGG--ACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317 |||||||| | ||| | |||| || || || || || | ||| ||| | Sbjct 2898 TCGTCACCCCA--CGTCGTGTAGAGACCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACT 2841 Query 66318 CACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 | || | || || || ||| || ||||| || ||||| | |||||||| |||| Sbjct 2840 CGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCGTAGAATAGAT 2781 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | || || || ||| ||| ||||||| || || | |||||||||||| ||||||| Sbjct 2780 CACGCGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCGAGGAACTCGAAGATGT 2721 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 |||| ||||| || || || || || |||||||||||| | || ||||||||||| || | Sbjct 2720 CGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTGAT 2661 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 | || || || || | |||||| || |||| ||| || ||||| ||||| || || Sbjct 2660 CCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGAGC 2601 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATA 66616 | || ||||| |||| || | || || || || | ||| || | | ||| || Sbjct 2600 CGTTTGTGCCACGGATGTACGA-GTTGGTCGCGCGGATGTTGTGCACGCTGACACCGATG 2542 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATG 66676 || |||||| ||| |||||| || || | | || | ||||| || || Sbjct 2541 CCGCCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAGATGCCTTCGATC 2482 Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736 ||||| |||| |||| || ||| |||| || || || || || ||| |||| Sbjct 2481 GAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGAGGCGTGCCGGCG 2422 Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796 ||| || || || || |||||||| ||| | | |||||||| | |||||||||| Sbjct 2421 TTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCTCG 2362 Query 66797 A 66797 | Sbjct 2361 A 2361 >seq957 Length=6759 Score = 178 bits (196), Expect = 1e-39 Identities = 401/590 (68%), Gaps = 12/590 (2%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 |||||||| | ||||| ||| || | | || | |||| |||||||| ||||| || Sbjct 5438 CGTTTCGTGCTCTTCCCGATCCAGGAGAACGAGGTCTGGCAGATGTACAAGAAGGCTGAG 5497 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTT-GTCCAAAGACATGAATGACTGGGAGCG 61172 || ||||||||||| ||| ||| |||| | || || ||| | || |||||| | Sbjct 5498 GCGAGCTTCTGGACGGCGGAAGAGATCGACCTCGTGCAC-GACCTCAAGGACTGGAACAA 5556 Query 61173 TTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 | || | ||| | | || || || || ||| | |||||||| || || || Sbjct 5557 CCTCACGGACAATGAGCGCTACTTTATCAAGCACGTGCTCGCGTTCTTCGCGGCCAGTGA 5616 Query 61233 CGGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAG-GAGGTGCAAGTGTCGGA 61289 || |||||||| ||||| | | |||| ||| |||| |||||||| || | || Sbjct 5617 TGGCATCGTCAACGAGAACCTCGCGATGAAC--TTCA-GCAGCGAGGTGCAGGTTCCTGA 5673 Query 61290 GGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAG 61349 ||||||||| |||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct 5674 GGCGCGTTGCTTCTACGGCTTCCAGATTGCGATTGAGAACATCCACTCGGAGGTGTACTC 5733 Query 61350 TGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCA 61408 | |||||||| |||||||||| ||| | | | | | |||| | | || |||| Sbjct 5734 GCTGCTCATCGACACGTACATCAAGGACCAGACCG-AGAAGAACCACCTTCTCCGCGCCA 5792 Query 61409 TCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-ACCAGT 61467 |||||||||| || ||| || ||| ||| | ||||| |||| ||| | || | Sbjct 5793 TCGAGACGATCCCTTGTGTGCAGAAGAAGGCGCACTGGGCGCTCAAGTGGTGCGACTCGC 5852 Query 61468 ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC 61527 | | || | || | || || | | || || || | |||||||| | || ||| Sbjct 5853 GCCGC-GCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCTGTCGAGGGCATCTTCTTC 5911 Query 61528 AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587 || ||||| | | ||||| ||| | ||||| || || |||||||| || || | | Sbjct 5912 TCGGGCTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGCCTCAGC 5971 Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||| || ||| | || || || |||||||| | || || || || || Sbjct 5972 TTCTCGAACGAGCTCATCTCGCGTGACGAGGGTCTCCACTGCGACTTCGC 6021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397458688678400