Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq11500 167 7e-39 seq5374 116 1e-23 >seq11500 Length=419 Score = 167 bits (184), Expect = 7e-39 Identities = 164/210 (78%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 287 AGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCT 346 |||||||| |||| |||||||| || ||||| ||||||||| |||||||||||||||||| Sbjct 372 AGGAAGGTAGGGATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCT 313 Query 347 ACAATGGACAATACAAAGGGCAGCGAAACCGCG----AGGTCAAGCAAATCCCATAAAGT 402 |||||| | ||||| | | || | | | | | |||||||| ||| | Sbjct 312 ACAATGATAATTACAATGAGAGGCAAGAATGATTCAAAATTGGAGCAAATCTTTAAAAAT 253 Query 403 TGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAAT 462 | | || |||||||||| | | |||||||||| | |||||||| |||||||||||||||| Sbjct 252 TAT-CTTAGTTCGGATTATGGGCTGCAACTCGCCCATATGAAGTTGGAATCGCTAGTAAT 194 Query 463 CGTAGATCAGCATGCTACGGTGAATACGTT 492 || ||| ||||||||| ||||||||| ||| Sbjct 193 CGCAGAACAGCATGCTGCGGTGAATATGTT 164 >seq5374 Length=1410 Score = 116 bits (128), Expect = 1e-23 Identities = 84/97 (87%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1304 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGCCTACACAAGCGGTGGAGCATGTGGTT 1363 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG 103 |||||||| ||||| ||||||||||||| ||||| Sbjct 1364 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG 1400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503780776960