Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq5374 255 2e-65 >seq5374 Length=1410 Score = 255 bits (282), Expect = 2e-65 Identities = 267/343 (78%), Gaps = 7/343 (2%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 |||| |||||| ||||||||| ||| | ||||||| |||| ||| |||| | Sbjct 672 GCGTAAGATTAGGTAGTTGGTAGTTTAAAAGACTACCAAGCCGACTATCTTTAGCTGGTT 731 Query 221 TGAGAGGGTGATCGGCCACATTGGAAC-TGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 ||| || ||||| |||||||||| || |||||||||| ||||||| | |||||| Sbjct 732 TGAAAGAATGATCAGCCACATTGGGACCTGAGACACGGCCCAAACTTTTTTAA-AGGCAG 790 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| ||| |||||| || ||||| |||| |||||| || ||||| || || Sbjct 791 CAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCAGCAATACCAAGTGAGTGAAGA 850 Query 340 AGGC-CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGA 398 |||| | ||| |||||||||| || | ||||| || |||||| |||||| | || || Sbjct 851 AGGCTAATTAGGTTGTAAAGCTCTTTCATTAAGGAGGAAAATGACAGTACTTAAAGAAGA 910 Query 399 AGCCCCGGCTAACTA--CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 456 || ||||||||| || |||||||||||||||||||||||| ||||| ||| |||| | Sbjct 911 AGTCCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGGGCGAGCATTATTC 969 Query 457 GGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||||| | | |||||||||||| ||||||||||| |||||| Sbjct 970 GGAATGA-TTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGT 1011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497381709824