Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5855 466 6e-129 seq5595 174 5e-41 >seq5855 Length=1206 Score = 466 bits (516), Expect = 6e-129 Identities = 383/459 (83%), Gaps = 19/459 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 753 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 812 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 813 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTC 872 Query 127 GGCCCGCG---AAGGAC---CTTAACGCCAGAAAATGGT-----CGGTGAAGACCAGTTC 175 ||||| ||| || |||| | |||| || || || | | |||| Sbjct 873 A-CCCGCACAAAAGCACAGGCTTACATCTAGAACTAGGCGCCCGCGAGGACGGCTAGTTG 931 Query 176 CG-CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGAA 232 | | |||| | ||||||||| ||| || ||||||||||||||| ||| || || Sbjct 932 CTACATCATGGTATAAGTAAAACAACATTAGAAGTAGTGGTATTTCACGGTTG-GCAGA- 989 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| Sbjct 990 --GCCTCCCACTTATTCTACACCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCAAGC 1047 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1048 TCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCG 1107 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1108 CTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTA 1167 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 ||||||||||||||||||||||||||||||||||||||| Sbjct 1168 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 1206 >seq5595 Length=1308 Score = 174 bits (192), Expect = 5e-41 Identities = 99/101 (98%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTCACTT 60 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||| ||||||| Sbjct 61 TGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634961653248