Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq5374 77.0 7e-12 >seq5374 Length=1410 Score = 77.0 bits (84), Expect = 7e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACT 124 |||| ||| | || ||||| ||||||| | | ||||| || |||| | || | Sbjct 891 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCTTCACTCACTTGGTATT 832 Query 125 TGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||| Sbjct 831 --GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGT 775 Query 185 TTGGACCGTGTCTCA-GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGT 243 |||| |||||||||| || ||||||||| || | | || ||| | | ||| || || Sbjct 774 TTGGGCCGTGTCTCAGGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGT 715 Query 244 AGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 |||| ||| | | ||| | || |||||||||| ||||| | |||| Sbjct 714 CGGCTTGGTAGTCTTTTAAACTACCAACTACCTAATCTTACGCAAACTCATC 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068644211712