Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6712 365 1e-98 seq9886 167 7e-39 >seq6712 Length=971 Score = 365 bits (404), Expect = 1e-98 Identities = 348/431 (81%), Gaps = 18/431 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | || ||||| | || ||||||||||||||||| Sbjct 549 GTTCTCATTCCAATTGCCCGACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCACTACC 607 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 608 TCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 667 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||| Sbjct 668 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGT 727 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| |||||||||||| |||| |||||||||||||| | ||| | || | || Sbjct 728 AGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAA-CTCAAT---CGATTTACCGC 783 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC--CCCGAAG--GGC 294 ||| |||| | || ||||||||||| ||| || | | | ||||||| || Sbjct 784 ACAA--AAGTGCGGTCCGCACAGTTATTATGACTCAACACAATACCAGCCCGAAGACTGC 841 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCG-GGGTTTTTA-GCATGTA 350 || | ||| ||||||||||| | ||| |||| ||| | ||| || | ||||||| Sbjct 842 ATT-GATTTCAATCTAATAAATGCTACCCGTCCGACAAGCAGTTGGTATTGATGCATGTA 900 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 |||||||||||||||| ||||||||||| |||||||||||||||| | || || |||||| Sbjct 901 TTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTAGACTATAACT 960 Query 411 GATTTAATGAG 421 ||| ||||||| Sbjct 961 GATATAATGAG 971 >seq9886 Length=526 Score = 167 bits (184), Expect = 7e-39 Identities = 111/122 (91%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 |||||||||||| | || || ||||||||| ||||||||||||||||||||||| ||| | Sbjct 1 TAAGGTACTATCGAGTAGACTATAACTGATATAATGAGCCATTCGCAGTTTCACAGTACA 60 Query 444 GA-TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 61 AAGTTGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGC 120 Query 503 AG 504 || Sbjct 121 AG 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510179844096