Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq422 262 3e-65 seq756 165 6e-36 >seq422 Length=12968 Score = 262 bits (290), Expect = 3e-65 Identities = 552/812 (68%), Gaps = 12/812 (1%) Strand=Plus/Plus Query 65992 CACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGT 66051 ||||||||||| || || | || ||||||||||| || || | |||||| || | || Sbjct 871 CACAAACTTGGACAGCGCGATGGACGCGAGGTTGCACACCGCGACCTCGTCGGGCGACGT 930 Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT 66111 ||||||| | ||| ||| || || || |||| || ||||| | ||||| || || Sbjct 931 GTACTCGAGCACCTCGCAGCAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTT 990 Query 66112 ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171 |||||| || || | |||||||||| ||||||||| ||||| ||||| | || || Sbjct 991 CGACTTGCGGTTACACGAGTCCTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGA 1050 Query 66172 CTCAATGATGGCGTGCCAAAGA-GC-GCGTGCCTTCACCGTACGTAC-CGCCCTACCTTT 66228 ||| | ||| ||| ||| || || ||| || | ||| | | | ||| | || | Sbjct 1051 CTCGAGGATCGCGAACCAGAGCTGCTGCGCGCGG--ATCGT-CTTGCGCGCGCGGCCCTC 1107 Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGG--ACAGACAT 66286 ||| ||||| || | ||| || ||||| |||||||| | ||| | |||| Sbjct 1108 GCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGTCACCCCA--CGTCGTGTAGAGACCC 1165 Query 66287 GGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAAT 66346 || || || || || | ||| ||| || || | || || || ||| || Sbjct 1166 GGTGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAG 1225 Query 66347 AGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGA 66406 ||||| || ||||| | |||||||| ||||| || || || ||| ||| ||||||| Sbjct 1226 AGATCGGGAATCCACATCGCGTAGAACAGATCACGAGCGCGGTGCAGCTCGTTGCCGTGG 1285 Query 66407 TTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCG 66466 || || | |||||||||||| ||||||||||| ||||| || || || || || ||| Sbjct 1286 TTCTTCTTGAGGTCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCG 1345 Query 66467 AACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACA 66526 ||||||||| | || ||||||||||| || || || || || || | |||||| || Sbjct 1346 AACGAGCCCTTGCGCTTGCCGCCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACG 1405 Query 66527 CGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT 66586 |||| ||| || ||||| ||||| || ||| || ||||| |||| || | || Sbjct 1406 CGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCACGGATGTACGA-GTTGGT 1464 Query 66587 -GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 || || || | ||| || | | |||||| || |||||| ||| |||||| || || Sbjct 1465 CGCGCGGATGTTGTGCACGCTGACACCAATGCCGCCGGCCCACTTGGAGATGCAGGCGCA 1524 Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705 | | || | ||||| || || |||||| |||| |||| || ||| |||| Sbjct 1525 CTGCTTGAGCGTGTCATAGATGCCCTCGATCGAGTCATCCTTCATGGCGAGCAGGAAGCA 1584 Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || || || || || ||| |||| ||| || || || || |||||||| || Sbjct 1585 CGACGACAGCTGCGGGCGCGGCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAA 1644 Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGA 66797 | | | |||||||| | ||||||||||| Sbjct 1645 GAAGCTTTGCGACATGTACTCGTACGTCTCGA 1676 >seq756 Length=9614 Score = 165 bits (182), Expect = 6e-36 Identities = 398/590 (67%), Gaps = 12/590 (2%) Strand=Plus/Minus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 |||||||| | ||||| ||| || | | || | |||| |||||||| ||||| || Sbjct 3005 CGTTTCGTGCTCTTCCCGATCCAGGAGAACGAGGTCTGGCAGATGTACAAGAAGGCTGAG 2946 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTT-GTCCAAAGACATGAATGACTGGGAGCG 61172 || ||||||||||| || ||| |||| | || || ||| | || |||||| | Sbjct 2945 GCGAGCTTCTGGACGGCTGAAGAGATCGACCTCGTGCAC-GACCTCAAGGACTGGAACAA 2887 Query 61173 TTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 | || | || | | || || || || ||| | |||||||| || || || Sbjct 2886 CCTCACGGACAACGAGCGCTACTTTATCAAGCACGTGCTCGCGTTCTTCGCGGCCAGTGA 2827 Query 61233 CGGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAG-GAGGTGCAAGTGTCGGA 61289 || |||||||| ||||| | | |||| ||| |||| |||||||| || | || Sbjct 2826 TGGCATCGTCAACGAGAACCTCGCGATGAAC--TTCA-GCAGCGAGGTGCAGGTTCCTGA 2770 Query 61290 GGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAG 61349 ||||||||| |||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct 2769 GGCGCGTTGCTTCTACGGCTTCCAGATTGCGATTGAGAACATCCACTCGGAGGTGTACTC 2710 Query 61350 TGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCA 61408 | |||||||| |||||||||| ||| | | | | | |||| | | || |||| Sbjct 2709 GCTGCTCATCGACACGTACATCAAGGACCAGACCG-AGAAGAACCACCTTCTCCGCGCCA 2651 Query 61409 TCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-ACCAGT 61467 |||||||||| || ||| || ||| || | ||||| |||| ||| | || | Sbjct 2650 TCGAGACGATCCCTTGTGTGCAGAAGAAGGCCCACTGGGCGCTCAAGTGGTGCGACTCGC 2591 Query 61468 ACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTC 61527 | | || | || | || || | | || || || | |||||||| | || ||| Sbjct 2590 GCCGC-GCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCCGTCGAGGGCATCTTCTTC 2532 Query 61528 AGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587 || ||||| | | ||||| ||| | ||||| || || |||||||| || || | | Sbjct 2531 TCGGGCTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGCCTCAGC 2472 Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||| || ||| | || || || |||||||| | || || || || || Sbjct 2471 TTCTCGAACGAGCTCATCTCGCGTGACGAGGGTCTCCACTGCGACTTCGC 2422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397497374032640